RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 GLI1P08151 1106 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 CISD3P0C7P0 127 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 PBX1P40424 430 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 SLC11A2P49281 568 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 TBX4P57082 545 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 UBXN1Q04323 297 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 E2F5Q15329 346 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 CRY1Q16526 586 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 MPPE1Q53F39 396 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 ADGRF1Q5T601 910 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 EMC10Q5UCC4 262 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 FYB2Q5VWT5 728 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 LAIR1Q6GTX8 287 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 PRR23BQ6ZRT6 265 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 CEP68Q76N32 757 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 SFTPA1Q8IWL2 248 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 WDTC1Q8N5D0 677 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 ALLCQ8N6M5 410 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 ZNF513Q8N8E2 541 aaPredicted RBP15.16■□□□□ 0.02
SEC13-208ENST00000397109 TXNDC5Q8NBS9 432 aaKnown RBP15.16■□□□□ 0.02
SEC13-208ENST00000397109 CCDC112Q8NEF3 446 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 GAB3Q8WWW8 586 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 BHMTQ93088 406 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 AZIN2Q96A70 460 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 SLC2A11Q9BYW1 496 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 PDCL3Q9H2J4 239 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 KCNF1Q9H3M0 494 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 KCND1Q9NSA2 647 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 POLR3BQ9NW08 1133 aaPredicted RBP15.16■□□□□ 0.02
SEC13-208ENST00000397109 PLK2Q9NYY3 685 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 GMEB2Q9UKD1 530 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 SLC27A6Q9Y2P4 619 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 SPAG17Q6Q759 2223 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 TEX33O43247 280 aa15.15■□□□□ 0.02
SEC13-208ENST00000397109 FYNP06241 537 aa15.15■□□□□ 0.02
SEC13-208ENST00000397109 PNMA6AP0CW24 399 aaPredicted RBP15.15■□□□□ 0.02
SEC13-208ENST00000397109 CHRM1P11229 460 aaPredicted RBP15.15■□□□□ 0.02
SEC13-208ENST00000397109 PXNP49023 591 aaPredicted RBP15.15■□□□□ 0.02
SEC13-208ENST00000397109 YWHAZP63104 245 aaKnown RBP15.15■□□□□ 0.02
SEC13-208ENST00000397109 EFHC1Q5JVL4 640 aa15.15■□□□□ 0.02
SEC13-208ENST00000397109 SPECC1LQ69YQ0 1117 aa15.15■□□□□ 0.02
SEC13-208ENST00000397109 TMC6Q7Z403 805 aa15.15■□□□□ 0.02
SEC13-208ENST00000397109 PASD1Q8IV76 773 aa15.15■□□□□ 0.02
SEC13-208ENST00000397109 GPR161Q8N6U8 529 aaKnown RBP15.15■□□□□ 0.02
SEC13-208ENST00000397109 TMEM35BQ8NCS4 154 aa15.15■□□□□ 0.02
SEC13-208ENST00000397109 DQX1Q8TE96 717 aaKnown RBP15.15■□□□□ 0.02
SEC13-208ENST00000397109 IPO4Q8TEX9 1081 aaKnown RBP15.15■□□□□ 0.02
SEC13-208ENST00000397109 DDI1Q8WTU0 396 aa15.15■□□□□ 0.02
SEC13-208ENST00000397109 CPXM1Q96SM3 734 aa15.15■□□□□ 0.02
SEC13-208ENST00000397109 DDX50Q9BQ39 737 aaKnown RBP15.15■□□□□ 0.02
SEC13-208ENST00000397109 POLMQ9NP87 494 aaPredicted RBP15.15■□□□□ 0.02
SEC13-208ENST00000397109 ASNSD1Q9NWL6 643 aa15.15■□□□□ 0.02
SEC13-208ENST00000397109 NAALADL1Q9UQQ1 740 aa15.15■□□□□ 0.02
SEC13-208ENST00000397109 TLR6Q9Y2C9 796 aa15.15■□□□□ 0.02
SEC13-208ENST00000397109 SDK1Q7Z5N4 2213 aa15.15■□□□□ 0.02
SEC13-208ENST00000397109 F8VZ95 297 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 TRIM24O15164 1050 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 IRAK2O43187 625 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 RPP40O75818 363 aaKnown RBP15.14■□□□□ 0.01
SEC13-208ENST00000397109 CYP11B1P15538 503 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 NTSR1P30989 418 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 HOXC13P31276 330 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 SYCP1Q15431 976 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 SDE2Q6IQ49 451 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 C1orf131Q8NDD1 294 aaKnown RBP15.14■□□□□ 0.01
SEC13-208ENST00000397109 TMA16Q96EY4 203 aaKnown RBP15.14■□□□□ 0.01
SEC13-208ENST00000397109 ZNF830Q96NB3 372 aaPredicted RBP15.14■□□□□ 0.01
SEC13-208ENST00000397109 GANQ9H2C0 597 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 SYNCQ9H7C4 482 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 ITIH6Q6UXX5 1313 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 ANTXRLA6NF34 631 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 SGK1O00141 431 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 NPC1O15118 1278 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 ACSL4O60488 711 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 RETP07949 1114 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 CDH5P33151 784 aaPredicted RBP15.14■□□□□ 0.01
SEC13-208ENST00000397109 POLR2FP61218 127 aaKnown RBP15.14■□□□□ 0.01
SEC13-208ENST00000397109 SRSF5Q13243 272 aaKnown RBP15.14■□□□□ 0.01
SEC13-208ENST00000397109 OR6B2Q6IFH4 312 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 TMEM92Q6UXU6 159 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 TOGARAM2Q6ZUX3 1019 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 CACNA2D4Q7Z3S7 1137 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 RASSF3Q86WH2 238 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 ZNF677Q86XU0 584 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 ZDHHC17Q8IUH5 632 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 UCMAQ8WVF2 138 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 SLC39A13Q96H72 371 aa15.14■□□□□ 0.01
SEC13-208ENST00000397109 PCMTD1Q96MG8 357 aaPredicted RBP15.14■□□□□ 0.01
SEC13-208ENST00000397109 FAM207AQ9NSI2 230 aaPredicted RBP15.14■□□□□ 0.01
SEC13-208ENST00000397109 WDR87Q6ZQQ6 2873 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 PRRT4C9JH25 899 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 GFRA2O00451 464 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 ZBTB24O43167 697 aaPredicted RBP15.13■□□□□ 0.01
SEC13-208ENST00000397109 TIMM44O43615 452 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 TSPAN3O60637 253 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 HSF2BPO75031 334 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 ADAM23O75077 832 aa15.13■□□□□ 0.01
SEC13-208ENST00000397109 LSM8O95777 96 aaKnown RBP15.13■□□□□ 0.01
SEC13-208ENST00000397109 HNRNPLP14866 589 aaKnown RBP eCLIP15.13■□□□□ 0.01
SEC13-208ENST00000397109 CDK17Q00537 523 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms