RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 BCCIPQ9P287 314 aaKnown RBP eCLIP14.52□□□□□ -0.09
SEC13-204ENST00000397099 DNAH14Q0VDD8 3507 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 CEP250Q9BV73 2442 aa14.52□□□□□ -0.09
SEC13-204ENST00000397099 DCDC2BA2VCK2 349 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 E5RJQ4 531 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 SGK1O00141 431 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 FOXN3O00409 490 aaPredicted RBP14.51□□□□□ -0.09
SEC13-204ENST00000397099 HSF2BPO75031 334 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 ZNF217O75362 1048 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 GABBR2O75899 941 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 HOXB2P14652 356 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 UCHL3P15374 230 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 GBP1P32455 592 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 MESP2Q0VG99 397 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 RAPGEF1Q13905 1077 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 AASDHQ4L235 1098 aaPredicted RBP14.51□□□□□ -0.09
SEC13-204ENST00000397099 ANO7Q6IWH7 933 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 ZNF677Q86XU0 584 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 CCDC117Q8IWD4 279 aaPredicted RBP14.51□□□□□ -0.09
SEC13-204ENST00000397099 CHPFQ8IZ52 775 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 TMEM35BQ8NCS4 154 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 NETO1Q8TDF5 533 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 IPO4Q8TEX9 1081 aaKnown RBP14.51□□□□□ -0.09
SEC13-204ENST00000397099 GABRG3Q99928 467 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 PDCL3Q9H2J4 239 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 RRN3Q9NYV6 651 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 SLC12A6Q9UHW9 1150 aa14.51□□□□□ -0.09
SEC13-204ENST00000397099 PIK3R2O00459 728 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 PAPSS1O43252 624 aaPredicted RBP14.5□□□□□ -0.09
SEC13-204ENST00000397099 ACSL4O60488 711 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 ADAM23O75077 832 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 EPN2O95208 641 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 LSM8O95777 96 aaKnown RBP14.5□□□□□ -0.09
SEC13-204ENST00000397099 APOEP02649 317 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 CLCN1P35523 988 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 ARID5AQ03989 594 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 STARD3Q14849 445 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 DRAP1Q14919 205 aaPredicted RBP14.5□□□□□ -0.09
SEC13-204ENST00000397099 PLK5Q496M5 336 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 EMC10Q5UCC4 262 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 TMEM92Q6UXU6 159 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 C11orf57Q6ZUT1 292 aaPredicted RBP14.5□□□□□ -0.09
SEC13-204ENST00000397099 MDGA1Q8NFP4 955 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 OLIG1Q8TAK6 271 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 DQX1Q8TE96 717 aaKnown RBP14.5□□□□□ -0.09
SEC13-204ENST00000397099 PIWIL1Q96J94 861 aaKnown RBP14.5□□□□□ -0.09
SEC13-204ENST00000397099 NAA15Q9BXJ9 866 aaKnown RBP14.5□□□□□ -0.09
SEC13-204ENST00000397099 SYNCQ9H7C4 482 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.5□□□□□ -0.09
SEC13-204ENST00000397099 PLK2Q9NYY3 685 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 INVSQ9Y283 1065 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 CACNA1AO00555 2505 aa14.5□□□□□ -0.09
SEC13-204ENST00000397099 PRRT4C9JH25 899 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 DCLK1O15075 740 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 CALCAP01258 141 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 FYNP06241 537 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 PTMSP20962 102 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 CDK11BP21127 795 aaKnown RBP14.49□□□□□ -0.09
SEC13-204ENST00000397099 KCNA4P22459 653 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 CDH5P33151 784 aaPredicted RBP14.49□□□□□ -0.09
SEC13-204ENST00000397099 SCNN1AP37088 669 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 CDK17Q00537 523 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 KCNMA1Q12791 1236 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 KRT31Q15323 416 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 SF3A2Q15428 464 aaKnown RBP14.49□□□□□ -0.09
SEC13-204ENST00000397099 HSP90AA4PQ58FG1 418 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 ACBD5Q5T8D3 534 aaPredicted RBP14.49□□□□□ -0.09
SEC13-204ENST00000397099 RNF43Q68DV7 783 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 SLC36A4Q6YBV0 504 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 SLC47A2Q86VL8 602 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 SFTPA1Q8IWL2 248 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 AHI1Q8N157 1196 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 HJURPQ8NCD3 748 aaPredicted RBP14.49□□□□□ -0.09
SEC13-204ENST00000397099 CLEC4CQ8WTT0 213 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 BHMTQ93088 406 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 SLC39A13Q96H72 371 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 BTN2A3PQ96KV6 586 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 TPSD1Q9BZJ3 242 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 ELOVL2Q9NXB9 296 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 THAP10Q9P2Z0 257 aaPredicted RBP14.49□□□□□ -0.09
SEC13-204ENST00000397099 CYTH4Q9UIA0 394 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 NAALADL1Q9UQQ1 740 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 PAXBP1Q9Y5B6 917 aa14.49□□□□□ -0.09
SEC13-204ENST00000397099 TCRBV21S2A2A0A5A6 115 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 LRRC10BA6NIK2 292 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 MSI1O43347 362 aaKnown RBP14.48□□□□□ -0.09
SEC13-204ENST00000397099 GDF9O60383 454 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 IGLV3-25P01717 112 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 ATP5BP06576 529 aaKnown RBP14.48□□□□□ -0.09
SEC13-204ENST00000397099 ZNF806P0C7X5 589 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 CYP11B1P15538 503 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 HOXD9P28356 352 aaPredicted RBP14.48□□□□□ -0.09
SEC13-204ENST00000397099 CCR1P32246 355 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 P2RY2P41231 377 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 ENPP2Q13822 863 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 PIK3R6Q5UE93 754 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 TTC39BQ5VTQ0 682 aaPredicted RBP14.48□□□□□ -0.09
SEC13-204ENST00000397099 EGFLAMQ63HQ2 1017 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 DPY19L2P1Q6NXN4 242 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 SLC26A9Q7LBE3 791 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms