RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 TNS3Q68CZ2 1445 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 MAST1Q9Y2H9 1570 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 OR10H2O60403 315 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 SH3BGRLO75368 114 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 KATNA1O75449 491 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 TIPRLO75663 272 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 ADH1AP07327 375 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 CPA2P48052 419 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 PEX5P50542 639 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 TUBP50607 506 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 SP3Q02447 781 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 TRAF2Q12933 501 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 NOGQ13253 232 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 PEX6Q13608 980 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 MFSD10Q14728 455 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 DGKKQ5KSL6 1271 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 CASP12Q6UXS9 341 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 ELOVL4Q9GZR5 314 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 ARHGAP31Q2M1Z3 1444 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 ZMYM2Q9UBW7 1377 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 O00370 1275 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 STX11O75558 287 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 GCATO75600 419 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 PPP1R37O75864 691 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 SRGNP10124 158 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 HDCP19113 662 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 PIK3R1P27986 724 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 TSC22D1Q15714 1073 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 FGD3Q5JSP0 725 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 ACAD10Q6JQN1 1059 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 STRA8Q7Z7C7 330 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 TTC7BQ86TV6 843 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 LONP2Q86WA8 852 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 CCDC103Q8IW40 242 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 IZUMO1Q8IYV9 350 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 ZNF34Q8IZ26 560 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 ZNF786Q8N393 782 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 SMYD1Q8NB12 490 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 MCCC1Q96RQ3 725 aaPredicted RBP7.37□□□□□ -1.23
UPF2-203ENST00000397053 CORO1BQ9BR76 489 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 CBWD1Q9BRT8 395 aa7.37□□□□□ -1.23
UPF2-203ENST00000397053 UBA2Q9UBT2 640 aaPredicted RBP7.37□□□□□ -1.23
UPF2-203ENST00000397053 TMEM120BA0PK00 339 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 BCLAF3A2AJT9 711 aaKnown RBP7.36□□□□□ -1.23
UPF2-203ENST00000397053 CENPXA8MT69 81 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 A8MX80 341 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 ECDO95905 644 aaPredicted RBP7.36□□□□□ -1.23
UPF2-203ENST00000397053 MT-CO1P00395 513 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 IL1BP01584 269 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 HOXC6P09630 235 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 CHN1P15882 459 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 NTSP30990 170 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 MLH1P40692 756 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 NPTX2P47972 431 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 PRKAG1P54619 331 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 CBFBQ13951 182 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 CAMK1Q14012 370 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 POU6F1Q14863 301 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 PAGE2BQ5JRK9 111 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 CDC73Q6P1J9 531 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 SLC27A1Q6PCB7 646 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 USP45Q70EL2 814 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 SH3BP5LQ7L8J4 393 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 AHI1Q8N157 1196 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 RIBC1Q8N443 379 aaPredicted RBP7.36□□□□□ -1.23
UPF2-203ENST00000397053 GRIN3AQ8TCU5 1115 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 RXFP2Q8WXD0 754 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 MS4A14Q96JA4 679 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 FAM111AQ96PZ2 611 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 OLFM1Q99784 485 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 BPIFA3Q9BQP9 254 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 PHF20Q9BVI0 1012 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 INTS13Q9NVM9 706 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 TAS2R13Q9NYV9 303 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 KLF15Q9UIH9 416 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 FBXO2Q9UK22 296 aaPredicted RBP7.36□□□□□ -1.23
UPF2-203ENST00000397053 ZNF232Q9UNY5 417 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 DNAJC16Q9Y2G8 782 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 TRAV19A0A0A6YYK7 116 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 NR5A2O00482 541 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 BIRC5O15392 142 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 TLL1O43897 1013 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 FGRP09769 529 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 CXCL8P10145 99 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 THRAP10827 490 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 ADORA2AP29274 412 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 MAPKAPK2P49137 400 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 RCN1Q15293 331 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 RBM43Q6ZSC3 357 aaKnown RBP7.36□□□□□ -1.23
UPF2-203ENST00000397053 ADGRG2Q8IZP9 1017 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 SAMD3Q8N6K7 520 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 ZNF248Q8NDW4 579 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 NKX2-3Q8TAU0 364 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 USP6NLQ92738 828 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 DTNBP1Q96EV8 351 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 CDCA5Q96FF9 252 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 SMARCD1Q96GM5 515 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 TMEM176AQ96HP8 235 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 CHP1Q99653 195 aa7.36□□□□□ -1.23
UPF2-203ENST00000397053 ZNF518BQ9C0D4 1074 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms