RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 TBC1D13Q9NVG8 400 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 GALNT8Q9NY28 637 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 COMMD9Q9P000 198 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 KIAA1257Q9ULG3 409 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 SIK3Q9Y2K2 1263 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 MED14O60244 1454 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 OR6B1O95007 311 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 F9P00740 461 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 ITGALP20701 1170 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 RXRBP28702 533 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 ERVK-24P63145 666 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 FGD3Q5JSP0 725 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 SAMD4BQ5PRF9 694 aaKnown RBP14.31□□□□□ -0.12
COL4A3-202ENST00000396578 STK32CQ86UX6 486 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 FNIP1Q8TF40 1166 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 RIT2Q99578 217 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 NRDE2Q9H7Z3 1164 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 PRKAG3Q9UGI9 489 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 CRABP2P29373 138 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 BCAT1P54687 386 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 PHF21BQ96EK2 531 aa14.31□□□□□ -0.12
COL4A3-202ENST00000396578 PSMD4P55036 377 aaKnown RBP14.3□□□□□ -0.12
COL4A3-202ENST00000396578 ILF2Q12905 390 aaKnown RBP14.3□□□□□ -0.12
COL4A3-202ENST00000396578 BHMTQ93088 406 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 CCDC3Q9BQI4 270 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 ZNF518BQ9C0D4 1074 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 EHD3Q9NZN3 535 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 A2ML1A8K2U0 1454 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 LOC100506127A0A0U1RQW1 187 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 SERPINE1P05121 402 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 PAX7P23759 505 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 KCTD21Q4G0X4 260 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 DHRSXQ8N5I4 330 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 ITFG1Q8TB96 612 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 NAALADL1Q9UQQ1 740 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 RRN3P2A6NIE6 340 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 FOXN3O00409 490 aaPredicted RBP14.3□□□□□ -0.12
COL4A3-202ENST00000396578 CPT1AP50416 773 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 TMEM132BQ14DG7 1078 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 GATAD2AQ86YP4 633 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 ARHGEF19Q8IW93 802 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 POMGNT2Q8NAT1 580 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 DGCR6LQ9BY27 220 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 DUSP10Q9Y6W6 482 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 CCDC130P13994 396 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 ME2P23368 584 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 CCNG2Q16589 344 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 ACTRT2Q8TDY3 377 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 FAM172AQ8WUF8 416 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 PSMD12O00232 456 aaPredicted RBP14.3□□□□□ -0.12
COL4A3-202ENST00000396578 C6orf222P0C671 652 aaPredicted RBP14.3□□□□□ -0.12
COL4A3-202ENST00000396578 MSH3P20585 1137 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 CASP4P49662 377 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 RPL10AP62906 217 aaKnown RBP14.3□□□□□ -0.12
COL4A3-202ENST00000396578 C16orf86Q6ZW13 317 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 MAP3K14Q99558 947 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 CNOT7Q9UIV1 285 aaKnown RBP14.3□□□□□ -0.12
COL4A3-202ENST00000396578 BCORL1Q5H9F3 1711 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 C19orf81C9J6K1 198 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 RGS20O76081 388 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 CYP2A7P20853 494 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 STX12Q86Y82 276 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 ADHFE1Q8IWW8 467 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 FAM84BQ96KN1 310 aaPredicted RBP14.3□□□□□ -0.12
COL4A3-202ENST00000396578 MTMR12Q9C0I1 747 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 SAR1AQ9NR31 198 aa14.3□□□□□ -0.12
COL4A3-202ENST00000396578 PLCL1Q15111 1095 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 ULK2Q8IYT8 1036 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 OR7A2PQ8NGA2 310 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 DLG3Q92796 817 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 CPNE1Q99829 537 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 A1CFQ9NQ94 594 aaKnown RBP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 KDM6BO15054 1643 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 USP42Q9H9J4 1324 aaKnown RBP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 RIPK2O43353 540 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 RNASEH1O60930 286 aaKnown RBP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 ZC3H11AO75152 810 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 LSM8O95777 96 aaKnown RBP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 NDUFB10O96000 172 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 MGAT5Q09328 741 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 SBK1Q52WX2 424 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 TMEM63BQ5T3F8 832 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 NT5DC4Q86YG4 428 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 GRIP2Q9C0E4 1043 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 MTIF3Q9H2K0 278 aaKnown RBP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 PRR12Q9ULL5 1215 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 IFRD1O00458 451 aaPredicted RBP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 NR3C2P08235 984 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 GZMAP12544 262 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 PTENP60484 403 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 N4BP2L1Q5TBK1 243 aaPredicted RBP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 FICDQ9BVA6 458 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 ATF5Q9Y2D1 282 aaPredicted RBP14.29□□□□□ -0.12
COL4A3-202ENST00000396578 SMIM22K7EJ46 135 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 SSNA1O43805 119 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 CYP7B1O75881 506 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 MCL1Q07820 350 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 XRRA1Q6P2D8 792 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 PROX1Q92786 737 aa14.29□□□□□ -0.12
COL4A3-202ENST00000396578 APOPT1Q96IL0 206 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms