RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 NRG1Q02297 640 aaPredicted RBP13.18□□□□□ -0.3
TRIM39-204ENST00000396548 EFHC2Q5JST6 749 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 GLIS1Q8NBF1 620 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 GRK7Q8WTQ7 553 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRIM39-204ENST00000396548 CAVIN3Q969G5 261 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 OLFM3Q96PB7 478 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 ALG13Q9NP73 1137 aaKnown RBP13.18□□□□□ -0.3
TRIM39-204ENST00000396548 INSL5Q9Y5Q6 135 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 GRXCR1A8MXD5 290 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 CXCL14O95715 111 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 HOXC13P31276 330 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 UBE3AQ05086 875 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 SHHQ15465 462 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 RFX8Q6ZV50 586 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 ZNF683Q8IZ20 524 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 MRPL43Q8N983 215 aaKnown RBP13.17□□□□□ -0.3
TRIM39-204ENST00000396548 DPF3Q92784 378 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 SERPINB11Q96P15 392 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 MTIF3Q9H2K0 278 aaKnown RBP13.17□□□□□ -0.3
TRIM39-204ENST00000396548 OLA1Q9NTK5 396 aaKnown RBP13.17□□□□□ -0.3
TRIM39-204ENST00000396548 FEZ2Q9UHY8 353 aaPredicted RBP13.17□□□□□ -0.3
TRIM39-204ENST00000396548 NFU1Q9UMS0 254 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 ZNF840PA6NDX5 716 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 TBX18O95935 607 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 FAM153BP0C7A2 387 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 CSH1P0DML2 217 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 CSH2P0DML3 217 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 CTNNB1P35222 781 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 PAFAH1B3Q15102 231 aaKnown RBP13.17□□□□□ -0.3
TRIM39-204ENST00000396548 FAM153CQ494X1 144 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 COL13A1Q5TAT6 717 aaPredicted RBP13.17□□□□□ -0.3
TRIM39-204ENST00000396548 SND1Q7KZF4 910 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM39-204ENST00000396548 PSMG2Q969U7 264 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 MAK16Q9BXY0 300 aaKnown RBP13.17□□□□□ -0.3
TRIM39-204ENST00000396548 LRRC3Q9BY71 257 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 FUT8Q9BYC5 575 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 CCSER2Q9H7U1 834 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 USP29Q9HBJ7 922 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 FAM114A2Q9NRY5 505 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 FAM153AQ9UHL3 310 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 SNX10Q9Y5X0 201 aa13.17□□□□□ -0.3
TRIM39-204ENST00000396548 RANBP2P49792 3224 aaKnown RBP13.16□□□□□ -0.3
TRIM39-204ENST00000396548 HIDE1A8MVS5 230 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 AMPD1P23109 780 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 ZNF135P52742 658 aaPredicted RBP13.16□□□□□ -0.3
TRIM39-204ENST00000396548 GDF10P55107 478 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 TWF1Q12792 350 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 ARL13BQ3SXY8 428 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 PDZD8Q8NEN9 1154 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 ART4Q93070 314 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 RTP4Q96DX8 246 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 C1orf74Q96LT6 269 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 RASAL2Q9UJF2 1139 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 TNRC18O15417 2968 aaPredicted RBP13.16□□□□□ -0.3
TRIM39-204ENST00000396548 DOCK4Q8N1I0 1966 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 ZFXP17010 805 aaPredicted RBP13.16□□□□□ -0.3
TRIM39-204ENST00000396548 CCR1P32246 355 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 NR2C2P49116 596 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 LMNB2Q03252 620 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 GBE1Q04446 702 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 TRIP4Q15650 581 aaPredicted RBP13.16□□□□□ -0.3
TRIM39-204ENST00000396548 KLHDC10Q6PID8 442 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 TCF25Q9BQ70 676 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 TMEM121Q9BTD3 319 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 KLC2Q9H0B6 622 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 OR12D3Q9UGF7 316 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 H3BRJ5 948 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 MAP2K7O14733 419 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 SASH3O75995 380 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 C1RP00736 705 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 TUBP50607 506 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 CLCN4P51793 760 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 C1orf228Q6PIY5 440 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 RHBDF2Q6PJF5 856 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 PRUNE1Q86TP1 453 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 POF1BQ8WVV4 589 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 IFT81Q8WYA0 676 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 P3H4Q92791 437 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 TXLNGYQ9BZA5 131 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 ADAM7Q9H2U9 754 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 C10orf88Q9H8K7 445 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 IL21Q9HBE4 155 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 ARFGAP3Q9NP61 516 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 DTLQ9NZJ0 730 aa13.16□□□□□ -0.3
TRIM39-204ENST00000396548 XPO7Q9UIA9 1087 aaKnown RBP13.16□□□□□ -0.3
TRIM39-204ENST00000396548 BCLAF3A2AJT9 711 aaKnown RBP13.15□□□□□ -0.3
TRIM39-204ENST00000396548 PAGE1O75459 146 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 ERLIN1O75477 346 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 RB1P06400 928 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 ALDH1A3P47895 512 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 EIF3EP60228 445 aaKnown RBP13.15□□□□□ -0.3
TRIM39-204ENST00000396548 RBM10P98175 930 aaKnown RBP13.15□□□□□ -0.3
TRIM39-204ENST00000396548 RING1Q06587 406 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 XRCC4Q13426 336 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 UNC45BQ8IWX7 931 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 DPH5Q9H2P9 285 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 ZNF334Q9HCZ1 680 aaPredicted RBP13.15□□□□□ -0.3
TRIM39-204ENST00000396548 WHRNQ9P202 907 aa13.15□□□□□ -0.3
TRIM39-204ENST00000396548 SNX24Q9Y343 169 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms