RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 ELMO3Q96BJ8 720 aa18.33■□□□□ 0.52
EXOSC3-202ENST00000396521 ERLEC1Q96DZ1 483 aa18.33■□□□□ 0.52
EXOSC3-202ENST00000396521 PAGE5Q96GU1 130 aa18.33■□□□□ 0.52
EXOSC3-202ENST00000396521 HEXIM2Q96MH2 286 aaKnown RBP18.33■□□□□ 0.52
EXOSC3-202ENST00000396521 LAMA5O15230 3695 aa18.33■□□□□ 0.52
EXOSC3-202ENST00000396521 APC2O95996 2303 aa18.33■□□□□ 0.52
EXOSC3-202ENST00000396521 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 LATS1O95835 1130 aa18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 PSMC2P35998 433 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 GRK6P43250 576 aa18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 GRIA4P48058 902 aa18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 SFSWAPQ12872 951 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 INAVAQ3KP66 663 aa18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 RAB41Q5JT25 222 aa18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 C1orf220Q5T0J3 134 aa18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 PPP1R26Q5T8A7 1209 aaPredicted RBP18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 RBBP8NLQ8NC74 664 aaPredicted RBP18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 TAS1R2Q8TE23 839 aa18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 GOLGA1Q92805 767 aa18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 LHX5Q9H2C1 402 aa18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 TMEM8AQ9HCN3 771 aa18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 FNDC3AQ9Y2H6 1198 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 HBS1LQ9Y450 684 aaKnown RBP18.32■□□□□ 0.52
EXOSC3-202ENST00000396521 TNFSF14O43557 240 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 PCDHGA12O60330 932 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 ZSCAN22P10073 491 aaPredicted RBP18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 CD58P19256 250 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 NR2F2P24468 414 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 GCLMP48507 274 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 MCCD1P59942 119 aaPredicted RBP18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 YWHAGP61981 247 aaKnown RBP eCLIP18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 TRIP4Q15650 581 aaPredicted RBP18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 ARHGAP17Q68EM7 881 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 KRT39Q6A163 491 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 PM20D1Q6GTS8 502 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 ANKRD52Q8NB46 1076 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 IGSF8Q969P0 613 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 BTBD1Q9H0C5 482 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 IL21RQ9HBE5 538 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 APOBEC3GQ9HC16 384 aaKnown RBP18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 SERTAD1Q9UHV2 236 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 RCOR1Q9UKL0 485 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 ADAMTS9Q9P2N4 1935 aa18.31■□□□□ 0.52
EXOSC3-202ENST00000396521 SLC12A8A0AV02 714 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 ACTN4O43707 911 aaKnown RBP18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 STX10O60499 249 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 ZBED1O96006 694 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 ATP5BP06576 529 aaKnown RBP18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 HMBSP08397 361 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 CDK4P11802 303 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 PRKCHP24723 683 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 COL28A1Q2UY09 1125 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 C19orf48Q6RUI8 117 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 PIGZQ86VD9 579 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 FAM186BQ8IYM0 893 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 SKA1Q96BD8 255 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 P2RY11Q96G91 374 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 TMEM176AQ96HP8 235 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 TMEM245Q9H330 911 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 SGK2Q9HBY8 427 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 SUN2Q9UH99 717 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 STOML2Q9UJZ1 356 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 SCML1Q9UN30 329 aa18.3■□□□□ 0.52
EXOSC3-202ENST00000396521 A0A1B0GVT2 93 aa18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 CD27P26842 260 aa18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 CSNK1EP49674 416 aaKnown RBP18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 BNC1Q01954 994 aa18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 PPP3CAQ08209 521 aa18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 TTC31Q49AM3 519 aaPredicted RBP18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 MPP7Q5T2T1 576 aa18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 ADGRF1Q5T601 910 aa18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 GRAMD1CQ8IYS0 662 aa18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 AHI1Q8N157 1196 aa18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 PDCD7Q8N8D1 485 aaKnown RBP18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 MDM1Q8TC05 714 aa18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 RNF139Q8WU17 664 aa18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 TMA16Q96EY4 203 aaKnown RBP18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 TOR4AQ9NXH8 423 aa18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 ANKRD6Q9Y2G4 727 aa18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 KNL1Q8NG31 2342 aa18.29■□□□□ 0.52
EXOSC3-202ENST00000396521 IGSF10Q6WRI0 2623 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 PAPSS1O43252 624 aaPredicted RBP18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 SEMA4FO95754 770 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 F13A1P00488 732 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 DNTTP04053 509 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 ATXN1LP0C7T5 689 aaKnown RBP18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 CMA1P23946 247 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 HOXD9P28356 352 aaPredicted RBP18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 CCT8P50990 548 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 TKTL1P51854 596 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 BCAT1P54687 386 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 KIF19Q2TAC6 998 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 FNDC3BQ53EP0 1204 aaKnown RBP18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 SOWAHCQ53LP3 525 aaPredicted RBP18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 TMEM215Q68D42 235 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 SCUBE3Q8IX30 993 aa18.28■□□□□ 0.52
EXOSC3-202ENST00000396521 GUF1Q8N442 669 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms