RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 MRFAP1L1Q96HT8 127 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 SELENOOQ9BVL4 669 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 RAB6CQ9H0N0 254 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 LMAN1LQ9HAT1 526 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 PIGVQ9NUD9 493 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 MARK1Q9P0L2 795 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 DLGAP2Q9P1A6 1054 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 STAP1Q9ULZ2 295 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 A0A087X0T9 212 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 ACSL4O60488 711 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 RTN2O75298 545 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 APOEP02649 317 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 FAM228BP0C875 321 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 CHRNB1P11230 501 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 KRT3P12035 628 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 GZMAP12544 262 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 SLC6A4P31645 630 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 GBP1P32455 592 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 CHKAP35790 457 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 EIF4A3P38919 411 aaKnown RBP20.69■□□□□ 0.9
SNCA-203ENST00000394986 SLC11A2P49281 568 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 SGSHP51688 502 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 ATP11AP98196 1134 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 SLC25A52Q3SY17 297 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 ADGRF1Q5T601 910 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 FYB2Q5VWT5 728 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 SFTPA1Q8IWL2 248 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 ETFBKMTQ8IXQ9 262 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 CPXM2Q8N436 756 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 EZH1Q92800 747 aaPredicted RBP20.69■□□□□ 0.9
SNCA-203ENST00000394986 MYEOVQ96EZ4 313 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 MCEEQ96PE7 176 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 NELL2Q99435 816 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 OSBPL6Q9BZF3 934 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 STOML2Q9UJZ1 356 aa20.69■□□□□ 0.9
SNCA-203ENST00000394986 ANTXRLA6NF34 631 aa20.68■□□□□ 0.9
SNCA-203ENST00000394986 C2CD4BA6NLJ0 364 aa20.68■□□□□ 0.9
SNCA-203ENST00000394986 AKR1B15C9JRZ8 316 aaPredicted RBP20.68■□□□□ 0.9
SNCA-203ENST00000394986 LATS1O95835 1130 aa20.68■□□□□ 0.9
SNCA-203ENST00000394986 PDGFRAP16234 1089 aa20.68■□□□□ 0.9
SNCA-203ENST00000394986 RFC1P35251 1148 aaPredicted RBP20.68■□□□□ 0.9
SNCA-203ENST00000394986 CCINQ13939 588 aa20.68■□□□□ 0.9
SNCA-203ENST00000394986 C15orf59Q2T9L4 293 aaPredicted RBP20.68■□□□□ 0.9
SNCA-203ENST00000394986 SH3PXD2AQ5TCZ1 1133 aa20.68■□□□□ 0.9
SNCA-203ENST00000394986 Q6ZS52 159 aa20.68■□□□□ 0.9
SNCA-203ENST00000394986 VPS36Q86VN1 386 aa20.68■□□□□ 0.9
SNCA-203ENST00000394986 CLDN23Q96B33 292 aa20.68■□□□□ 0.9
SNCA-203ENST00000394986 RRN3Q9NYV6 651 aa20.68■□□□□ 0.9
SNCA-203ENST00000394986 GFRA2O00451 464 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 TULP3O75386 442 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 PENKP01210 267 aaPredicted RBP20.67■□□□□ 0.9
SNCA-203ENST00000394986 CCR1P32246 355 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 RPL7AP62424 266 aaKnown RBP20.67■□□□□ 0.9
SNCA-203ENST00000394986 DEUP1Q05D60 604 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 GRSF1Q12849 480 aaKnown RBP eCLIP20.67■□□□□ 0.9
SNCA-203ENST00000394986 CDO1Q16878 200 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 CCDC14Q49A88 953 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 PPP1R15BQ5SWA1 713 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 RAP1GAP2Q684P5 730 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 PPP1R2P3Q6NXS1 205 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 ARCQ7LC44 396 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 CNGA4Q8IV77 575 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 DRC7Q8IY82 874 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 PHTF2Q8N3S3 785 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 DDI1Q8WTU0 396 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 ZNF653Q96CK0 615 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 PRICKLE1Q96MT3 831 aaPredicted RBP20.67■□□□□ 0.9
SNCA-203ENST00000394986 CHP1Q99653 195 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 ISCUQ9H1K1 167 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 ANLNQ9NQW6 1124 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 TMPRSS4Q9NRS4 437 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 DNAJC17Q9NVM6 304 aaKnown RBP20.67■□□□□ 0.9
SNCA-203ENST00000394986 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.67■□□□□ 0.9
SNCA-203ENST00000394986 CLEC4EQ9ULY5 219 aa20.67■□□□□ 0.9
SNCA-203ENST00000394986 SIGLEC16A6NMB1 481 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 KCNU1A8MYU2 1149 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 NCAM2O15394 837 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 CACNG3O60359 315 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 ADCY5O95622 1261 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 ABCB4P21439 1286 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 SDC4P31431 198 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 GGCXP38435 758 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 GFPT1Q06210 699 aaPredicted RBP20.66■□□□□ 0.9
SNCA-203ENST00000394986 GAS6Q14393 721 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 TSR1Q2NL82 804 aaKnown RBP20.66■□□□□ 0.9
SNCA-203ENST00000394986 BNIPLQ7Z465 357 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 CHSY1Q86X52 802 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 TC2NQ8N9U0 490 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 AZIN2Q96A70 460 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 PGAP3Q96FM1 320 aaPredicted RBP20.66■□□□□ 0.9
SNCA-203ENST00000394986 VCPIP1Q96JH7 1222 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 BTN2A3PQ96KV6 586 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 PNKPQ96T60 521 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 ARHGEF4Q9NR80 690 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 ZNHIT6Q9NWK9 470 aaKnown RBP20.66■□□□□ 0.9
SNCA-203ENST00000394986 MYO1AQ9UBC5 1043 aa20.66■□□□□ 0.9
SNCA-203ENST00000394986 CNOT8Q9UFF9 292 aaKnown RBP20.66■□□□□ 0.9
SNCA-203ENST00000394986 I6L893 689 aaPredicted RBP20.65■□□□□ 0.9
SNCA-203ENST00000394986 CYBBP04839 570 aa20.65■□□□□ 0.9
SNCA-203ENST00000394986 GPD1P21695 349 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms