RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CCDC150Q8NCX0 1101 aa22.12■■□□□ 1.13
TRAF4-203ENST00000394925 RHBDD1Q8TEB9 315 aa22.12■■□□□ 1.13
TRAF4-203ENST00000394925 KIAA1522Q9P206 1035 aaPredicted RBP22.12■■□□□ 1.13
TRAF4-203ENST00000394925 TRAF3IP3Q9Y228 551 aa22.12■■□□□ 1.13
TRAF4-203ENST00000394925 ATXN1LP0C7T5 689 aaKnown RBP22.11■■□□□ 1.13
TRAF4-203ENST00000394925 KRT13P13646 458 aa22.11■■□□□ 1.13
TRAF4-203ENST00000394925 HLA-EP13747 358 aa22.11■■□□□ 1.13
TRAF4-203ENST00000394925 NR2F2P24468 414 aa22.11■■□□□ 1.13
TRAF4-203ENST00000394925 CSNK1EP49674 416 aaKnown RBP22.11■■□□□ 1.13
TRAF4-203ENST00000394925 YWHAGP61981 247 aaKnown RBP eCLIP22.11■■□□□ 1.13
TRAF4-203ENST00000394925 INTS8Q75QN2 995 aaKnown RBP22.11■■□□□ 1.13
TRAF4-203ENST00000394925 ARHGAP18Q8N392 663 aa22.11■■□□□ 1.13
TRAF4-203ENST00000394925 C1orf216Q8TAB5 229 aa22.11■■□□□ 1.13
TRAF4-203ENST00000394925 SLC2A11Q9BYW1 496 aa22.11■■□□□ 1.13
TRAF4-203ENST00000394925 SLCO1B1Q9Y6L6 691 aa22.11■■□□□ 1.13
TRAF4-203ENST00000394925 GOLGA8CPA6NN73 597 aa22.1■■□□□ 1.13
TRAF4-203ENST00000394925 TIMM44O43615 452 aa22.1■■□□□ 1.13
TRAF4-203ENST00000394925 PIGZQ86VD9 579 aa22.1■■□□□ 1.13
TRAF4-203ENST00000394925 FAM186BQ8IYM0 893 aa22.1■■□□□ 1.13
TRAF4-203ENST00000394925 OR2T3Q8NH03 318 aa22.1■■□□□ 1.13
TRAF4-203ENST00000394925 BAHD1Q8TBE0 780 aaPredicted RBP22.1■■□□□ 1.13
TRAF4-203ENST00000394925 CDC6Q99741 560 aa22.1■■□□□ 1.13
TRAF4-203ENST00000394925 ARID3AQ99856 593 aa22.1■■□□□ 1.13
TRAF4-203ENST00000394925 C6orf106Q9H6K1 298 aaPredicted RBP22.1■■□□□ 1.13
TRAF4-203ENST00000394925 TOR4AQ9NXH8 423 aa22.1■■□□□ 1.13
TRAF4-203ENST00000394925 CFAP45Q9UL16 551 aa22.1■■□□□ 1.13
TRAF4-203ENST00000394925 RAXQ9Y2V3 346 aa22.1■■□□□ 1.13
TRAF4-203ENST00000394925 PCDHGB2Q9Y5G2 931 aa22.1■■□□□ 1.13
TRAF4-203ENST00000394925 URB1O60287 2271 aaKnown RBP22.1■■□□□ 1.13
TRAF4-203ENST00000394925 A0A1B0GVL5 298 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 FLRT2O43155 660 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 TSPAN3O60637 253 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 ACSL1P33121 698 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 AFF3P51826 1226 aaKnown RBP22.09■■□□□ 1.13
TRAF4-203ENST00000394925 FNDC3BQ53EP0 1204 aaKnown RBP22.09■■□□□ 1.13
TRAF4-203ENST00000394925 DBX2Q6ZNG2 339 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 TMPRSS7Q7RTY8 843 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 FAM217AQ8IXS0 508 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 ZNF366Q8N895 744 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 SLC4A11Q8NBS3 891 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 HNRNPLLQ8WVV9 542 aaKnown RBP22.09■■□□□ 1.13
TRAF4-203ENST00000394925 NDRG1Q92597 394 aaKnown RBP22.09■■□□□ 1.13
TRAF4-203ENST00000394925 PLD4Q96BZ4 506 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 UBXN6Q9BZV1 441 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 PCED1AQ9H1Q7 454 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 LHX5Q9H2C1 402 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 TMEM8AQ9HCN3 771 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 RCOR1Q9UKL0 485 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 MAPK8IP1Q9UQF2 711 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 BTBD3Q9Y2F9 522 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 TMEM131Q92545 1883 aa22.09■■□□□ 1.13
TRAF4-203ENST00000394925 PFKFB1P16118 471 aa22.08■■□□□ 1.13
TRAF4-203ENST00000394925 TKTL1P51854 596 aa22.08■■□□□ 1.13
TRAF4-203ENST00000394925 DNM1Q05193 864 aaKnown RBP22.08■■□□□ 1.13
TRAF4-203ENST00000394925 CAMK2GQ13555 558 aaPredicted RBP22.08■■□□□ 1.13
TRAF4-203ENST00000394925 SUZ12Q15022 739 aaKnown RBP22.08■■□□□ 1.13
TRAF4-203ENST00000394925 KIF19Q2TAC6 998 aa22.08■■□□□ 1.13
TRAF4-203ENST00000394925 MPPE1Q53F39 396 aa22.08■■□□□ 1.13
TRAF4-203ENST00000394925 SOWAHCQ53LP3 525 aaPredicted RBP22.08■■□□□ 1.13
TRAF4-203ENST00000394925 RAB41Q5JT25 222 aa22.08■■□□□ 1.13
TRAF4-203ENST00000394925 ATL3Q6DD88 541 aa22.08■■□□□ 1.13
TRAF4-203ENST00000394925 MARCH9Q86YJ5 346 aa22.08■■□□□ 1.13
TRAF4-203ENST00000394925 CYB5D2Q8WUJ1 264 aa22.08■■□□□ 1.13
TRAF4-203ENST00000394925 SEMA4DQ92854 862 aa22.08■■□□□ 1.13
TRAF4-203ENST00000394925 TMEM176AQ96HP8 235 aa22.08■■□□□ 1.13
TRAF4-203ENST00000394925 CISHQ9NSE2 258 aa22.08■■□□□ 1.13
TRAF4-203ENST00000394925 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.08■■□□□ 1.13
TRAF4-203ENST00000394925 SNX11Q9Y5W9 270 aa22.08■■□□□ 1.13
TRAF4-203ENST00000394925 SMG1Q96Q15 3661 aaKnown RBP22.08■■□□□ 1.12
TRAF4-203ENST00000394925 ZBED1O96006 694 aa22.07■■□□□ 1.12
TRAF4-203ENST00000394925 CENPBP07199 599 aaPredicted RBP22.07■■□□□ 1.12
TRAF4-203ENST00000394925 HOXD9P28356 352 aaPredicted RBP22.07■■□□□ 1.12
TRAF4-203ENST00000394925 HLA-FP30511 346 aa22.07■■□□□ 1.12
TRAF4-203ENST00000394925 PSMC2P35998 433 aaKnown RBP22.07■■□□□ 1.12
TRAF4-203ENST00000394925 RAD23BP54727 409 aa22.07■■□□□ 1.12
TRAF4-203ENST00000394925 TRIP4Q15650 581 aaPredicted RBP22.07■■□□□ 1.12
TRAF4-203ENST00000394925 NFIL3Q16649 462 aa22.07■■□□□ 1.12
TRAF4-203ENST00000394925 FMNL3Q8IVF7 1028 aa22.07■■□□□ 1.12
TRAF4-203ENST00000394925 ULBP1Q9BZM6 244 aa22.07■■□□□ 1.12
TRAF4-203ENST00000394925 PLA2G4CQ9UP65 541 aa22.07■■□□□ 1.12
TRAF4-203ENST00000394925 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.07■■□□□ 1.12
TRAF4-203ENST00000394925 KCNK3O14649 394 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 MYL1P05976 194 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 HARS2P49590 506 aaKnown RBP22.06■■□□□ 1.12
TRAF4-203ENST00000394925 SLC8A3P57103 927 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 TEAD4Q15561 434 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 ARHGAP17Q68EM7 881 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 KRT39Q6A163 491 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 CHST9Q7L1S5 443 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 TTC39CQ8N584 583 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 ANKRD52Q8NB46 1076 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 TMEM245Q9H330 911 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 TM9SF3Q9HD45 589 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 SFMBT1Q9UHJ3 866 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 USP25Q9UHP3 1055 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 ANKRD6Q9Y2G4 727 aa22.06■■□□□ 1.12
TRAF4-203ENST00000394925 TULP2O00295 520 aa22.05■■□□□ 1.12
TRAF4-203ENST00000394925 DKK1O94907 266 aa22.05■■□□□ 1.12
TRAF4-203ENST00000394925 PRR29P0C7W0 189 aa22.05■■□□□ 1.12
TRAF4-203ENST00000394925 RPL13P26373 211 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms