RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 SLC6A11P48066 632 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 AFF3P51826 1226 aaKnown RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 GUCY2FP51841 1108 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 UCNP55089 124 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 RHDQ02161 417 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 GOLGA8FQ08AF8 430 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 GOLGA8DPQ0D2H9 430 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 TOB2Q14106 344 aaPredicted RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 SETDB1Q15047 1291 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 SF3A1Q15459 793 aaKnown RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 ZRSR1Q15695 479 aaKnown RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 ZNF174Q15697 407 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 SMAD1Q15797 465 aaKnown RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 HLA-BQ31612 363 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 EARS2Q5JPH6 523 aaKnown RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 EMC10Q5UCC4 262 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 SDHAF4Q5VUM1 108 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 TDRD10Q5VZ19 366 aaKnown RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 GRAMD4Q6IC98 578 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 SLFN12LQ6IEE8 588 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 HS2ST1Q7LGA3 356 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 ADAT2Q7Z6V5 191 aaKnown RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 LRRTM3Q86VH5 581 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 WFDC8Q8IUA0 241 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 ZCCHC9Q8N567 271 aaKnown RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 STK35Q8TDR2 534 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 IPO4Q8TEX9 1081 aaKnown RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 FGF11Q92914 225 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 KRTAP4-6Q9BYQ5 205 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 TM6SF1Q9BZW5 370 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 DDX43Q9NXZ2 648 aaKnown RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 GCNT4Q9P109 453 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 GPN3Q9UHW5 284 aaPredicted RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 C2CD2Q9Y426 696 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 CELSR3Q9NYQ7 3312 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 E2F8A0AVK6 867 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 FAM149AA5PLN7 773 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 C2orf78A6NCI8 922 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 PLK4O00444 970 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 ABLIM1O14639 778 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 NPC1O15118 1278 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 ADAM23O75077 832 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 C1QL1O75973 258 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 MBL2P11226 248 aaPredicted RBP8.36□□□□□ -1.07
CASP4-201ENST00000393150 GUCY2CP25092 1073 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 ITPKBP27987 946 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 ERCC5P28715 1186 aaPredicted RBP8.36□□□□□ -1.07
CASP4-201ENST00000393150 TNFSF9P41273 254 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 IL12RB1P42701 662 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 WASP42768 502 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 GPR15P49685 360 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 ZNF132P52740 706 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 CXADRP78310 365 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 SLC7A9P82251 487 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 CFAP221Q4G0U5 840 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 RINT1Q6NUQ1 792 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 RHBDF2Q6PJF5 856 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 VSTM1Q6UX27 236 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 DENND5BQ6ZUT9 1274 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 SLC41A1Q8IVJ1 513 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 CCDC83Q8IWF9 413 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 DMRTC2Q8IXT2 367 aaPredicted RBP8.36□□□□□ -1.07
CASP4-201ENST00000393150 NAT16Q8N8M0 369 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 TMEM161BQ8NDZ6 487 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 UCMAQ8WVF2 138 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 DNASE2BQ8WZ79 361 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 SNX19Q92543 992 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 TRIM11Q96F44 468 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 TOE1Q96GM8 510 aaKnown RBP8.36□□□□□ -1.07
CASP4-201ENST00000393150 SPATA17Q96L03 361 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 NUP58Q9BVL2 599 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 CCSER1Q9C0I3 900 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 NRSN2Q9GZP1 204 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 TMEM60Q9H2L4 133 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 SOX17Q9H6I2 414 aaPredicted RBP8.36□□□□□ -1.07
CASP4-201ENST00000393150 GJB4Q9NTQ9 266 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 KBTBD4Q9NVX7 518 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 CFAP97Q9P2B7 532 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.36□□□□□ -1.07
CASP4-201ENST00000393150 PCDHGB7Q9Y5F8 929 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 HEMK1Q9Y5R4 338 aaPredicted RBP8.36□□□□□ -1.07
CASP4-201ENST00000393150 CPQQ9Y646 472 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 KALRNO60229 2985 aa8.36□□□□□ -1.07
CASP4-201ENST00000393150 ANO9A1A5B4 782 aa8.35□□□□□ -1.07
CASP4-201ENST00000393150 B8ZZF3 427 aa8.35□□□□□ -1.07
CASP4-201ENST00000393150 GFRA2O00451 464 aa8.35□□□□□ -1.07
CASP4-201ENST00000393150 EPB41L2O43491 1005 aaKnown RBP8.35□□□□□ -1.07
CASP4-201ENST00000393150 PFKFB2O60825 505 aa8.35□□□□□ -1.07
CASP4-201ENST00000393150 DEAF1O75398 565 aaPredicted RBP8.35□□□□□ -1.07
CASP4-201ENST00000393150 IL18RAPO95256 599 aa8.35□□□□□ -1.07
CASP4-201ENST00000393150 WISP1O95388 367 aa8.35□□□□□ -1.07
CASP4-201ENST00000393150 KRT18P05783 430 aaKnown RBP8.35□□□□□ -1.07
CASP4-201ENST00000393150 HNRNPLP14866 589 aaKnown RBP eCLIP8.35□□□□□ -1.07
CASP4-201ENST00000393150 MAOBP27338 520 aa8.35□□□□□ -1.07
CASP4-201ENST00000393150 MAGEA11P43364 429 aa8.35□□□□□ -1.07
CASP4-201ENST00000393150 POU5F1Q01860 360 aaKnown RBP8.35□□□□□ -1.07
CASP4-201ENST00000393150 ARID5AQ03989 594 aa8.35□□□□□ -1.07
CASP4-201ENST00000393150 MYO1EQ12965 1108 aa8.35□□□□□ -1.07
CASP4-201ENST00000393150 POSTNQ15063 836 aa8.35□□□□□ -1.07
CASP4-201ENST00000393150 ZC2HC1CQ53FD0 456 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms