RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 EBF4Q9BQW3 602 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 GCOM2Q9BZD3 368 aaPredicted RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 PHACTR1Q9C0D0 580 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 TUBGCP4Q9UGJ1 667 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 TAGLN3Q9UI15 199 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 HCRTO43612 131 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 LSM8O95777 96 aaKnown RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 ERBB2P04626 1255 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 FESP07332 822 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 SMIM10L2AP0DMW4 78 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 SMIM10L2BP0DMW5 78 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 RARBP10826 455 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 SAT1P21673 171 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 EIF4BP23588 611 aaKnown RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 SESN2P58004 480 aaPredicted RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 CRADDP78560 199 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 RBP5P82980 135 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 TRIP10Q15642 601 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 UBR7Q8N806 425 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 SLC44A1Q8WWI5 657 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 KATNBL1Q9H079 304 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 MIS12Q9H081 205 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 CYLDQ9NQC7 956 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 ZNF212Q9UDV6 495 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 DCAF8L1A6NGE4 600 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 ZMPSTE24O75844 475 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 C6orf222P0C671 652 aaPredicted RBP11.19□□□□□ -0.62
BRF1-204ENST00000392557 DESP17661 470 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 TFDP2Q14188 446 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 TCHHL1Q5QJ38 904 aaPredicted RBP11.19□□□□□ -0.62
BRF1-204ENST00000392557 SKA1Q96BD8 255 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 RSAD1Q9HA92 442 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 KCNK13Q9HB14 408 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 FLRT1Q9NZU1 646 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 DNAJC16Q9Y2G8 782 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 ROR2Q01974 943 aaKnown RBP11.19□□□□□ -0.62
BRF1-204ENST00000392557 PEX6Q13608 980 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 LBRQ14739 615 aaKnown RBP11.19□□□□□ -0.62
BRF1-204ENST00000392557 RAB6CQ53S08 254 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 OLFML2BQ68BL8 750 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 ATP2A3Q93084 1043 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 WDR83Q9BRX9 315 aaKnown RBP11.19□□□□□ -0.62
BRF1-204ENST00000392557 RAB6CQ9H0N0 254 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 ASB7Q9H672 318 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 GOLGA2P5Q9HBQ8 144 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 NMRK2Q9NPI5 230 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 MORF4L1Q9UBU8 362 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 TSPAN16Q9UKR8 245 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 NR2E3Q9Y5X4 410 aa11.19□□□□□ -0.62
BRF1-204ENST00000392557 SIGLEC16A6NMB1 481 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 TREHO43280 583 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 STIP1P31948 543 aaKnown RBP11.18□□□□□ -0.62
BRF1-204ENST00000392557 DNAL1Q4LDG9 190 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 FAM47CQ5HY64 1035 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 LPCAT4Q643R3 524 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 DENND5BQ6ZUT9 1274 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 PHC3Q8NDX5 983 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 ZMAT2Q96NC0 199 aaKnown RBP11.18□□□□□ -0.62
BRF1-204ENST00000392557 SLC7A8Q9UHI5 535 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 PPM1HQ9ULR3 514 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 CILPO75339 1184 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 HMGCRP04035 888 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 PROCP04070 461 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 F7P08709 466 aaPredicted RBP11.18□□□□□ -0.62
BRF1-204ENST00000392557 ADORA2BP29275 332 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 OCRLQ01968 901 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 CUL3Q13618 768 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 GOLGA7BQ2TAP0 167 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 CWF19L1Q69YN2 538 aaKnown RBP11.18□□□□□ -0.62
BRF1-204ENST00000392557 IQSEC1Q6DN90 963 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 TRMT10BQ6PF06 316 aaKnown RBP11.18□□□□□ -0.62
BRF1-204ENST00000392557 KBTBD2Q8IY47 623 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 ST13P4Q8IZP2 240 aaPredicted RBP11.18□□□□□ -0.62
BRF1-204ENST00000392557 RXFP2Q8WXD0 754 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 PIWIL1Q96J94 861 aaKnown RBP11.18□□□□□ -0.62
BRF1-204ENST00000392557 MRPL45Q9BRJ2 306 aaKnown RBP11.18□□□□□ -0.62
BRF1-204ENST00000392557 CEP41Q9BYV8 373 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 A8MXQ7 604 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 CFLARO15519 480 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 RECQL4O94761 1208 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 GSTA2P09210 222 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 CTSHP09668 335 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 GSTT1P30711 240 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 MED21Q13503 144 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 TRMT5Q32P41 509 aaKnown RBP11.18□□□□□ -0.62
BRF1-204ENST00000392557 MMEL1Q495T6 779 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.18□□□□□ -0.62
BRF1-204ENST00000392557 ZC3H12AQ5D1E8 599 aaKnown RBP11.18□□□□□ -0.62
BRF1-204ENST00000392557 TUBGCP5Q96RT8 1024 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 CENPKQ9BS16 269 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 NT5C1AQ9BXI3 368 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 ZNF518BQ9C0D4 1074 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 AP5M1Q9H0R1 490 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 SSU72Q9NP77 194 aaKnown RBP11.18□□□□□ -0.62
BRF1-204ENST00000392557 KCNK4Q9NYG8 393 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 IL1RAPL1Q9NZN1 696 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 PAK5Q9P286 719 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 SLC17A6Q9P2U8 582 aa11.18□□□□□ -0.62
BRF1-204ENST00000392557 RPL26L1Q9UNX3 145 aaKnown RBP11.18□□□□□ -0.62
BRF1-204ENST00000392557 hCG_2014768A0A024R1R8 64 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms