RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 TMEM237Q96Q45 408 aa19.64■□□□□ 0.73
CCDC50-202ENST00000392456 CRISPLD2Q9H0B8 497 aa19.64■□□□□ 0.73
CCDC50-202ENST00000392456 TXLNGQ9NUQ3 528 aa19.64■□□□□ 0.73
CCDC50-202ENST00000392456 QPCTLQ9NXS2 382 aa19.64■□□□□ 0.73
CCDC50-202ENST00000392456 DDX43Q9NXZ2 648 aaKnown RBP19.64■□□□□ 0.73
CCDC50-202ENST00000392456 RPL26L1Q9UNX3 145 aaKnown RBP19.64■□□□□ 0.73
CCDC50-202ENST00000392456 CDK4P11802 303 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 FAAP100Q0VG06 881 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 GOLGA7BQ2TAP0 167 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 TRIM60Q495X7 471 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 ZNF280BQ86YH2 543 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 ANKLE1Q8NAG6 615 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 GDAP1Q8TB36 358 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 PGBD4Q96DM1 585 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 FAM189BP81408 668 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 OGDHQ02218 1023 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 TLE2Q04725 743 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 FOXD4Q12950 439 aaPredicted RBP19.63■□□□□ 0.73
CCDC50-202ENST00000392456 TIGD5Q53EQ6 642 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 GAB3Q8WWW8 586 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 PRKAG3Q9UGI9 489 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 RASAL2Q9UJF2 1139 aa19.63■□□□□ 0.73
CCDC50-202ENST00000392456 GOLGA8SH3BPF8 625 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 GABBR2O75899 941 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 B3GAT3O94766 335 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 COL6A2P12110 1019 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 BRCC3P46736 316 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 RGS7P49802 495 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 ZNF252P-AS1Q0IIN9 211 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 BFSP2Q13515 415 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.62■□□□□ 0.73
CCDC50-202ENST00000392456 PKDCCQ504Y2 493 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 PMF1Q6P1K2 205 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 UNC93AQ86WB7 457 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 SCAIQ8N9R8 606 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 FNDC8Q8TC99 324 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 PIWIL1Q96J94 861 aaKnown RBP19.62■□□□□ 0.73
CCDC50-202ENST00000392456 MCEEQ96PE7 176 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 SNX25Q9H3E2 840 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 PARVAQ9NVD7 372 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 TMEM59LQ9UK28 342 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 SCN5AQ14524 2016 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 ENPP3O14638 875 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 SPOPO43791 374 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 ENTPD5O75356 428 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 DDHD2O94830 711 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 ARFIP2P53365 341 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 LLGL1Q15334 1064 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 PLEKHG4Q58EX7 1191 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 SLC7A5P1Q8MH63 180 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 CRYBG2Q8N1P7 616 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 TTC39CQ8N584 583 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 WNT8AQ9H1J5 351 aa19.62■□□□□ 0.73
CCDC50-202ENST00000392456 FAM124BQ9H5Z6 455 aaPredicted RBP19.62■□□□□ 0.73
CCDC50-202ENST00000392456 DENND2DQ9H6A0 471 aaPredicted RBP19.62■□□□□ 0.73
CCDC50-202ENST00000392456 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.62■□□□□ 0.73
CCDC50-202ENST00000392456 FBXO9Q9UK97 447 aaPredicted RBP19.62■□□□□ 0.73
CCDC50-202ENST00000392456 TMEM191CA6NGB0 347 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 CALB1P05937 261 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 HSPA8P11142 646 aaKnown RBP19.61■□□□□ 0.73
CCDC50-202ENST00000392456 TCF4P15884 667 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 S100A1P23297 94 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 TKTP29401 623 aaKnown RBP19.61■□□□□ 0.73
CCDC50-202ENST00000392456 CYP2C18P33260 490 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 LBX1P52954 281 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 DCTN2Q13561 401 aaKnown RBP19.61■□□□□ 0.73
CCDC50-202ENST00000392456 TRIM67Q6ZTA4 783 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 FEZF2Q8TBJ5 459 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 CASP10Q92851 521 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 NEUROG2Q9H2A3 272 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 SYNCQ9H7C4 482 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 KIAA1257Q9ULG3 409 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 NR2E1Q9Y466 385 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 BHMG1C9JSJ3 638 aaPredicted RBP19.61■□□□□ 0.73
CCDC50-202ENST00000392456 ENDOUP21128 410 aaKnown RBP19.61■□□□□ 0.73
CCDC50-202ENST00000392456 ADORA2BP29275 332 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 GATMP50440 423 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 CTU1Q7Z7A3 348 aaKnown RBP19.61■□□□□ 0.73
CCDC50-202ENST00000392456 XYLT1Q86Y38 959 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 WDR75Q8IWA0 830 aaKnown RBP19.61■□□□□ 0.73
CCDC50-202ENST00000392456 TOP6BLQ8N6T0 577 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 JOSD2Q8TAC2 188 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 NMD3Q96D46 503 aaKnown RBP19.61■□□□□ 0.73
CCDC50-202ENST00000392456 C18orf8Q96DM3 657 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 HIPK3Q9H422 1215 aa19.61■□□□□ 0.73
CCDC50-202ENST00000392456 PITPNM1O00562 1244 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 GABRDO14764 452 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 RFC1P35251 1148 aaPredicted RBP19.6■□□□□ 0.73
CCDC50-202ENST00000392456 ADRM1Q16186 407 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 CCDC6Q16204 474 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 DNAJC24Q6P3W2 148 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 LRRC8BQ6P9F7 803 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 LRRC74BQ6ZQY2 392 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 ANKRD33Q7Z3H0 272 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 KLHL7Q8IXQ5 586 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 SLC2A14Q8TDB8 520 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 AP1M1Q9BXS5 423 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 TPK1Q9H3S4 243 aa19.6■□□□□ 0.73
CCDC50-202ENST00000392456 MRPL47Q9HD33 250 aaKnown RBP19.6■□□□□ 0.73
CCDC50-202ENST00000392456 EURLQ9NYK6 297 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms