RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 POLR3GO15318 223 aaPredicted RBP12.68□□□□□ -0.38
TMCO1-202ENST00000392129 RPL17P18621 184 aaKnown RBP12.68□□□□□ -0.38
TMCO1-202ENST00000392129 RBL1P28749 1068 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 HCAR3P49019 387 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 NRLP54845 237 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 RPL10AP62906 217 aaKnown RBP12.68□□□□□ -0.38
TMCO1-202ENST00000392129 MORF4L2Q15014 288 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 OTOP2Q7RTS6 562 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 PCGF5Q86SE9 256 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 GOLGA6L1Q8N7Z2 621 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 RTP4Q96DX8 246 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 TMEM169Q96HH4 297 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 CLSTN3Q9BQT9 956 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 IL23AQ9NPF7 189 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 COMMD8Q9NX08 183 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 MFHAS1Q9Y4C4 1052 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 MRPL42Q9Y6G3 142 aaKnown RBP12.68□□□□□ -0.38
TMCO1-202ENST00000392129 LTBP2Q14767 1821 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 C2CD2LO14523 706 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 DCLK1O15075 740 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 KCNN4O15554 427 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 RNF40O75150 1001 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 LAG3P18627 525 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 ZNF135P52742 658 aaPredicted RBP12.68□□□□□ -0.38
TMCO1-202ENST00000392129 SLC45A4Q5BKX6 768 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 BRMS1LQ5PSV4 323 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 TRMT10CQ7L0Y3 403 aaKnown RBP12.68□□□□□ -0.38
TMCO1-202ENST00000392129 BZW1Q7L1Q6 419 aaKnown RBP12.68□□□□□ -0.38
TMCO1-202ENST00000392129 C16orf59Q7L2K0 433 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 CDKL3Q8IVW4 592 aaPredicted RBP12.68□□□□□ -0.38
TMCO1-202ENST00000392129 ZCCHC9Q8N567 271 aaKnown RBP12.68□□□□□ -0.38
TMCO1-202ENST00000392129 COLGALT1Q8NBJ5 622 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 OR2W6PQ8NHA6 318 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 FBXO32Q969P5 355 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 PWWP2AQ96N64 755 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 OSBPL2Q9H1P3 480 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 ARHGEF38Q9NXL2 777 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 GMIPQ9P107 970 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 OR12D3Q9UGF7 316 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 NUDT5Q9UKK9 219 aa12.68□□□□□ -0.38
TMCO1-202ENST00000392129 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
TMCO1-202ENST00000392129 CARNS1A5YM72 827 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 GOLGA8KD6RF30 607 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 RIPK2O43353 540 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 NUDT17P0C025 328 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 ERCC2P18074 760 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 TPI1P60174 286 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 DSG1Q02413 1049 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 ZNF844Q08AG5 666 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 SLC29A2Q14542 456 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 PAFAH1B3Q15102 231 aaKnown RBP12.67□□□□□ -0.38
TMCO1-202ENST00000392129 CEP85LQ5SZL2 805 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 MSANTD2Q6P1R3 559 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 UBE2Q1Q7Z7E8 422 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 PPIL6Q8IXY8 311 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 CPT1BQ92523 772 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 ARL8AQ96BM9 186 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 SERPINB11Q96P15 392 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 OLFM3Q96PB7 478 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 HAPLN3Q96S86 360 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 YME1L1Q96TA2 773 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 CDC42EP4Q9H3Q1 356 aaKnown RBP12.67□□□□□ -0.38
TMCO1-202ENST00000392129 TMEM51Q9NW97 253 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 CLIC5Q9NZA1 410 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 SPG21Q9NZD8 308 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 AFF4Q9UHB7 1163 aaKnown RBP12.67□□□□□ -0.38
TMCO1-202ENST00000392129 SHOC2Q9UQ13 582 aa12.67□□□□□ -0.38
TMCO1-202ENST00000392129 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.66□□□□□ -0.38
TMCO1-202ENST00000392129 HACD1B0YJ81 288 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 MSI1O43347 362 aaKnown RBP12.66□□□□□ -0.38
TMCO1-202ENST00000392129 MFSD11O43934 449 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 EN2P19622 333 aaPredicted RBP12.66□□□□□ -0.38
TMCO1-202ENST00000392129 CCR1P32246 355 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 ACTN2P35609 894 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 TUFMP49411 452 aaKnown RBP12.66□□□□□ -0.38
TMCO1-202ENST00000392129 GLUD2P49448 558 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 PSEN1P49768 467 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 EIF3BP55884 814 aaKnown RBP12.66□□□□□ -0.38
TMCO1-202ENST00000392129 TAF10Q12962 218 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 PPP2R5DQ14738 602 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 DENND2CQ68D51 928 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 CEP128Q6ZU80 1094 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 HOOK3Q86VS8 718 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 RELL1Q8IUW5 271 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 NAT8LQ8N9F0 302 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 ZNF461Q8TAF7 563 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 GIPC2Q8TF65 315 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 LRRN4Q8WUT4 740 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 PRCCQ92733 491 aaPredicted RBP12.66□□□□□ -0.38
TMCO1-202ENST00000392129 CEP295NLQ96MC4 621 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 QKIQ96PU8 341 aaKnown RBP eCLIP12.66□□□□□ -0.387e-9■■■■■ 36.4
TMCO1-202ENST00000392129 RBM15Q96T37 977 aaKnown RBP eCLIP12.66□□□□□ -0.38
TMCO1-202ENST00000392129 EPAS1Q99814 870 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 HERC2P3Q9BVR0 1158 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 DNAJC17Q9NVM6 304 aaKnown RBP12.66□□□□□ -0.38
TMCO1-202ENST00000392129 VPS18Q9P253 973 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 PAK5Q9P286 719 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 SNX10Q9Y5X0 201 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 LRIG2O94898 1065 aa12.66□□□□□ -0.38
TMCO1-202ENST00000392129 ABLIM3O94929 683 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms