RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 PSMC5P62195 406 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 TUBA4AP68366 448 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 KCNC4Q03721 635 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 PDPK2PQ6A1A2 396 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 NIPAL1Q6NVV3 410 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 LDHDQ86WU2 507 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 ZNF677Q86XU0 584 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 CBWD2Q8IUF1 395 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 FBXL13Q8NEE6 735 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 CHPT1Q8WUD6 406 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 ACSF2Q96CM8 615 aaPredicted RBP15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 ISOC1Q96CN7 298 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 GCOM2Q9BZD3 368 aaPredicted RBP15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 TMEM8AQ9HCN3 771 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 TRNAU1APQ9NX07 287 aaKnown RBP15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 UTP6Q9NYH9 597 aaKnown RBP15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 PCDHB2Q9Y5E7 798 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 KAT6AQ92794 2004 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 CXorf49A8MYA2 514 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 TOM1L1O75674 476 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 CFHP08603 1231 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 MYL4P12829 197 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 CDH3P22223 829 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 CTBSQ01459 385 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 LRRC38Q5VT99 294 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 TXNRD3NBQ6F5E7 133 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 CTAGE3PQ8IX95 158 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 FEZF2Q8TBJ5 459 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 DCUN1D5Q9BTE7 237 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 DHX33Q9H6R0 707 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 PNPLA8Q9NP80 782 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 IP6K2Q9UHH9 426 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 MYH9P35579 1960 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 SPAG6O75602 509 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 DDNO94850 711 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 STAMBPO95630 424 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 INHBBP09529 407 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 ZNF26P17031 533 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 CRHR1P34998 444 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 DEPDC1Q5TB30 811 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 OGFOD2Q6N063 350 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 CLVS1Q8IUQ0 354 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 GSDMBQ8TAX9 411 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 ACTL9Q8TC94 416 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 C12orf43Q96C57 262 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 WRNIP1Q96S55 665 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 RTKNQ9BST9 563 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 CAAP1Q9H8G2 361 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 TOPORSQ9NS56 1045 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 OLAHQ9NV23 265 aa15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 CNOT11Q9UKZ1 510 aaKnown RBP15.09■□□□□ 0.01
VPS9D1-201ENST00000389386 PRSS51A0A1B0GVH4 220 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 C7orf72A4D263 438 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 ZNF701M0R085 212 aaPredicted RBP15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 NFIBO00712 420 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 BMP10O95393 424 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 GSRP00390 522 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 C8BP07358 591 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 CA8P35219 290 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 RPL7AP62424 266 aaKnown RBP15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 SNRNP48Q6IEG0 339 aaKnown RBP15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 DLK2Q6UY11 383 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 RNF169Q8NCN4 708 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 POMGNT1Q8WZA1 660 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 VCPIP1Q96JH7 1222 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 RNF181Q9P0P0 153 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 MYRFQ9Y2G1 1151 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 TTLL3Q9Y4R7 772 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 SCINQ9Y6U3 715 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 LTBP3Q9NS15 1303 aa15.08■□□□□ 0.01
VPS9D1-201ENST00000389386 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.08■□□□□ 0
VPS9D1-201ENST00000389386 PSMD12O00232 456 aaPredicted RBP15.08■□□□□ 0
VPS9D1-201ENST00000389386 GAS7O60861 476 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 PSMD10O75832 226 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 P4HBP07237 508 aaKnown RBP15.08■□□□□ 0
VPS9D1-201ENST00000389386 NELFEP18615 380 aaKnown RBP15.08■□□□□ 0
VPS9D1-201ENST00000389386 NCF2P19878 526 aaPredicted RBP15.08■□□□□ 0
VPS9D1-201ENST00000389386 EIF2B2P49770 351 aaKnown RBP15.08■□□□□ 0
VPS9D1-201ENST00000389386 OTUD4Q01804 1114 aaKnown RBP15.08■□□□□ 0
VPS9D1-201ENST00000389386 BMPR2Q13873 1038 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 CCDC153Q494R4 210 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 FASTKD1Q53R41 847 aaKnown RBP15.08■□□□□ 0
VPS9D1-201ENST00000389386 LGSNQ5TDP6 509 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 NEPROQ6NW34 567 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 CPNE9Q8IYJ1 553 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 NDUFAF2Q8N183 169 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 TMEM102Q8N9M5 508 aaPredicted RBP15.08■□□□□ 0
VPS9D1-201ENST00000389386 IL31RAQ8NI17 732 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 PPP1R14CQ8TAE6 165 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 APBB2Q92870 758 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 PI4K2AQ9BTU6 479 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 HIPK3Q9H422 1215 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 DNAJC28Q9NX36 388 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 CYP3A4P08684 503 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 EPHA3P29320 983 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 SLC1A6P48664 564 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 NOMO3P69849 1222 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 GCNT1Q02742 428 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 FLOT2Q14254 428 aa15.08■□□□□ 0
VPS9D1-201ENST00000389386 SNRNP35Q16560 246 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms