RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 ERP44Q9BS26 406 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 EPC1Q9H2F5 836 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 SYBUQ9NX95 663 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 DCDC2Q9UHG0 476 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 ATP6V1HQ9UI12 483 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 LOC100653049A0A140TA62 436 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 KRT34O76011 436 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 CHN1P15882 459 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 CHKAP35790 457 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 SNRPD1P62314 119 aaKnown RBP15.24■□□□□ 0.03
LRRK1-201ENST00000388948 ITGA9Q13797 1035 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 ZPBP2Q6X784 338 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 MAGEC3Q8TD91 643 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 WDR24Q96S15 920 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 RPRD1BQ9NQG5 326 aaKnown RBP15.24■□□□□ 0.03
LRRK1-201ENST00000388948 RBM12Q9NTZ6 932 aaKnown RBP15.24■□□□□ 0.03
LRRK1-201ENST00000388948 KATNA1O75449 491 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 FGBP02675 491 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 LRRC36Q1X8D7 754 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 WSCD1Q658N2 575 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 ALKBH2Q6NS38 261 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 NIPA1Q7RTP0 329 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 PLD3Q8IV08 490 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 REM2Q8IYK8 340 aaPredicted RBP15.24■□□□□ 0.03
LRRK1-201ENST00000388948 ZNF655Q8N720 491 aaPredicted RBP15.24■□□□□ 0.03
LRRK1-201ENST00000388948 PIK3R5Q8WYR1 880 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 CLIP3Q96DZ5 547 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 THTPAQ9BU02 230 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 GAKO14976 1311 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 C16orf96A6NNT2 1141 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 USP27XA6NNY8 438 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 EIF4BP23588 611 aaKnown RBP15.24■□□□□ 0.03
LRRK1-201ENST00000388948 CYP20A1Q6UW02 462 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 COMMD2Q86X83 199 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 LENG9Q96B70 501 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 SGSM3Q96HU1 749 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 KLHL28Q9NXS3 571 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 LRRC14BA6NHZ5 514 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 NT5C1B-RDH14C9J2C7 533 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 RAD51CO43502 376 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 SPATA31D3P0C874 917 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 YBX3P16989 372 aaKnown RBP eCLIP15.24■□□□□ 0.03
LRRK1-201ENST00000388948 SPATA31D4Q6ZUB0 917 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 SIX5Q8N196 739 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 TATDN2Q93075 761 aa15.24■□□□□ 0.03
LRRK1-201ENST00000388948 PRR23D1E9PI22 279 aaPredicted RBP15.23■□□□□ 0.03
LRRK1-201ENST00000388948 PRR23D2P0DMB1 279 aaPredicted RBP15.23■□□□□ 0.03
LRRK1-201ENST00000388948 PRPF39Q86UA1 669 aaKnown RBP15.23■□□□□ 0.03
LRRK1-201ENST00000388948 TMEM121Q9BTD3 319 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 MANSC1Q9H8J5 431 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 BLOC1S6Q9UL45 172 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 CTDNEP1O95476 244 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 CSH1P0DML2 217 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 CSH2P0DML3 217 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 CSTF3Q12996 717 aaKnown RBP15.23■□□□□ 0.03
LRRK1-201ENST00000388948 RASGRP2Q7LDG7 609 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 DENND1CQ8IV53 801 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 ZSWIM1Q9BR11 485 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 SEPT3Q9UH03 358 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 SLC27A5Q9Y2P5 690 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 SERPINB10P48595 397 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 GUCY1A3Q02108 690 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 RUNX1T1Q06455 604 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 DNAL1Q4LDG9 190 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 RAET1GQ6H3X3 334 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 MYOCQ99972 504 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 SYT17Q9BSW7 474 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 MPP6Q9NZW5 540 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 TAF6LQ9Y6J9 622 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 ZC3H13Q5T200 1668 aaKnown RBP15.23■□□□□ 0.03
LRRK1-201ENST00000388948 FAM86B1E9PN63 330 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 FAM86B2P0C5J1 330 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 TYMPP19971 482 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 RERGLQ9H628 205 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 ARL2BPQ9Y2Y0 163 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 LTFP02788 710 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 IFNA16P05015 189 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 PSMD5Q16401 504 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 DDX42Q86XP3 938 aaKnown RBP eCLIP15.23■□□□□ 0.03
LRRK1-201ENST00000388948 DEFB106AQ8N104 65 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 ELMO3Q96BJ8 720 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 ZBTB45Q96K62 511 aaPredicted RBP15.23■□□□□ 0.03
LRRK1-201ENST00000388948 PANX3Q96QZ0 392 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 SCN3BQ9NY72 215 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 CCDC189A1A4V9 331 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 RAD51BO15315 384 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 ERN1O75460 977 aaKnown RBP15.23■□□□□ 0.03
LRRK1-201ENST00000388948 MPP3Q13368 585 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 OTOP1Q7RTM1 612 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 KIAA0319LQ8IZA0 1049 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 FLCNQ8NFG4 579 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 RIN3Q8TB24 985 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 CNDP1Q96KN2 507 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 ST3GAL5Q9UNP4 418 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 HES2Q9Y543 173 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 RAD54BQ9Y620 910 aa15.23■□□□□ 0.03
LRRK1-201ENST00000388948 A0A0A6YYK5 440 aaPredicted RBP15.22■□□□□ 0.03
LRRK1-201ENST00000388948 KDM4FA0A1W2PPD8 638 aa15.22■□□□□ 0.03
LRRK1-201ENST00000388948 PPP1R3GB7ZBB8 358 aa15.22■□□□□ 0.03
LRRK1-201ENST00000388948 GLRA3O75311 464 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms