RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 CPNE1Q99829 537 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 PSMA4P25789 261 aaKnown RBP13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 MAP3K7CLP57077 242 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 CDH17Q12864 832 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 LBRQ14739 615 aaKnown RBP13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 POU6F1Q14863 301 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 ZBTB49Q6ZSB9 765 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 KCNMB4Q86W47 210 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 EFHBQ8N7U6 833 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 SNX19Q92543 992 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 UNKQ9C0B0 810 aaKnown RBP13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 NMRAL1Q9HBL8 299 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 APPL1Q9UKG1 709 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 CORO1CQ9ULV4 474 aaPredicted RBP13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 EFR3BQ9Y2G0 817 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 NFASCO94856 1347 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 MROH7Q68CQ1 1323 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 HACD1B0YJ81 288 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 TBC1D12O60347 775 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 WFS1O76024 890 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 NFICP08651 508 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 ETFBP38117 255 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 MMP14P50281 582 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 PTPN20Q4JDL3 420 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 SPANXN3Q5MJ09 141 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 OSMRQ99650 979 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 MROH8Q9H579 483 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 MYH8P13535 1937 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 DUOX1Q9NRD9 1551 aa13.05□□□□□ -0.32
DNMT3A-204ENST00000380756 KDM3BQ7LBC6 1761 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 A0A0A0MRY4 1105 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 TPP1O14773 563 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 AVILO75366 819 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 FBXO21O94952 628 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 MYCP01106 439 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 ERVK-10P10266 1014 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 MYL4P12829 197 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 ME2P23368 584 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 RIPOR1Q6ZS17 1223 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 ERO1BQ86YB8 467 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 DAW1Q8N136 415 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 SPATA13Q96N96 652 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 EBNA1BP2Q99848 306 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 KATNAL1Q9BW62 490 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 FAM192AQ9GZU8 254 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 RUBCNLQ9H714 662 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 ARL8BQ9NVJ2 186 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 C2CD2Q9Y426 696 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 ADGRA2Q96PE1 1338 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 COL1A1P02452 1464 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 RBP1P09455 135 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 MRNIPQ6NTE8 343 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 SH3BP5LQ7L8J4 393 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 ARCQ7LC44 396 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 NET1Q7Z628 596 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 SLC2A14Q8TDB8 520 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 UPF1Q92900 1129 aaKnown RBP eCLIP13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 ASIC4Q96FT7 647 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 CELF6Q96J87 481 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 MECRQ9BV79 373 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 CDT1Q9H211 546 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 GPAMQ9HCL2 828 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 RIC8BQ9NVN3 520 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 UBDO15205 165 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 ALBP02768 609 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 ACVR2BQ13705 512 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 RFWD2Q8NHY2 731 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 CEP19Q96LK0 163 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 ACO2Q99798 780 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 FICDQ9BVA6 458 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 TRIM54Q9BYV2 358 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 PHACTR1Q9C0D0 580 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 ASCC2Q9H1I8 757 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 XPNPEP3Q9NQH7 507 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 CD274Q9NZQ7 290 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 AFF4Q9UHB7 1163 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 SLC30A1Q9Y6M5 507 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 LRRC37A3O60309 1634 aa13.04□□□□□ -0.32
DNMT3A-204ENST00000380756 GOLGA8TH3BQL2 631 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 RHOBTB1O94844 696 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 FAM58BPP0C7Q3 252 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 PTPRAP18433 802 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 NFKBIAP25963 317 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 ABCG1P45844 678 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 FAM183BPQ6ZVS7 135 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 EFL1Q7Z2Z2 1120 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 NT5DC4Q86YG4 428 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 ZNF555Q8NEP9 628 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 OR6Y1Q8NGX8 325 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 GCNAQ96QF7 691 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 KIF17Q9P2E2 1029 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 ARHGAP28Q9P2N2 729 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 COQ4Q9Y3A0 265 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 TOPAZ1Q8N9V7 1692 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 GSC2O15499 205 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 C4BPAP04003 597 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 NAB1Q13506 487 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 ALYREFQ86V81 257 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 CHSY1Q86X52 802 aa13.03□□□□□ -0.32
DNMT3A-204ENST00000380756 BLOC1S5Q8TDH9 187 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms