RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 CYP3A43Q9HB55 503 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 PNPLA8Q9NP80 782 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 TFPIP10646 304 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 THPOP40225 353 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 SKP1P63208 163 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 AMPD2Q01433 879 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 GALNT3Q14435 633 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 DGLUCYQ7Z3D6 616 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 MSL3Q8N5Y2 521 aaKnown RBP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 JPH1Q9HDC5 661 aaPredicted RBP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 DDX18Q9NVP1 670 aaKnown RBP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 INTS10Q9NVR2 710 aaKnown RBP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 M0QYT0 321 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 CBX4O00257 560 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 IGF2BP3O00425 579 aaKnown RBP eCLIP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 PLOD2O00469 737 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 EIF3HO15372 352 aaKnown RBP eCLIP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 MTSS1O43312 755 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 P4HBP07237 508 aaKnown RBP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 ATP2C1P98194 919 aaPredicted RBP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 MYBPC3Q14896 1274 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 ZNHIT3Q15649 155 aaPredicted RBP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 SHQ1Q6PI26 577 aaKnown RBP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 SLC35G2Q8TBE7 412 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 TP53INP1Q96A56 240 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 SLC38A7Q9NVC3 462 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 A0A075B6Q4 140 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 RGS14O43566 566 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 PTPN3P26045 913 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 PCSK1P29120 753 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 KCNA10Q16322 511 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 AGKQ53H12 422 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 FOXP4Q8IVH2 680 aaPredicted RBP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 TTC29Q8NA56 475 aaPredicted RBP13.59□□□□□ -0.23
HIPK3-202ENST00000379016 ATL1Q8WXF7 558 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 CHID1Q9BWS9 393 aa13.59□□□□□ -0.23
HIPK3-202ENST00000379016 OTOL1A6NHN0 477 aaPredicted RBP13.58□□□□□ -0.23
HIPK3-202ENST00000379016 ERVV-2B6SEH9 535 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 hCG_1984214I3L0E3 225 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 PHGDHO43175 533 aaKnown RBP13.58□□□□□ -0.23
HIPK3-202ENST00000379016 MTA2O94776 668 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 CYP2A7P20853 494 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 RAD23AP54725 363 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 RESTQ13127 1097 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 USP41Q3LFD5 358 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 PTAR1Q7Z6K3 402 aaPredicted RBP13.58□□□□□ -0.23
HIPK3-202ENST00000379016 ATCAYQ86WG3 371 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 UNC5CLQ8IV45 518 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 OMDQ99983 421 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 CST11Q9H112 138 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 EPC1Q9H2F5 836 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 CRISPLD1Q9H336 500 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 EFCAB1Q9HAE3 211 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 THG1LQ9NWX6 298 aaKnown RBP13.58□□□□□ -0.23
HIPK3-202ENST00000379016 PAK5Q9P286 719 aa13.58□□□□□ -0.23
HIPK3-202ENST00000379016 CCDC154A6NI56 674 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 CLPTM1O96005 669 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 NOS2P35228 1153 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 IGFALSP35858 605 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ACAP1Q15027 740 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 PFKFB3Q16875 520 aaPredicted RBP13.58□□□□□ -0.24
HIPK3-202ENST00000379016 KBTBD12Q3ZCT8 623 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ATP13A4Q4VNC1 1196 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ERICH5Q6P6B1 374 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 SYT15Q9BQS2 421 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 SPATA9Q9BWV2 254 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ADGRE3Q9BY15 652 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ATPIF1Q9UII2 106 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 USP18Q9UMW8 372 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 NPTXRO95502 500 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 GMFBP60983 142 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ING5Q8WYH8 240 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 NT5C1AQ9BXI3 368 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 TRIM36Q9NQ86 728 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 RSL1D1O76021 490 aaKnown RBP13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ANXA9O76027 345 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 GIMD1P0DJR0 217 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ISLR2Q6UXK2 745 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 DET1Q7L5Y6 550 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 KLHL4Q9C0H6 718 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 OGDHLQ9ULD0 1010 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 BLMP54132 1417 aaPredicted RBP13.58□□□□□ -0.24
HIPK3-202ENST00000379016 TMEM120BA0PK00 339 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 GRID2IPA4D2P6 1211 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 G3V2T6 193 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 TCF4P15884 667 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 BYSLQ13895 437 aaKnown RBP13.58□□□□□ -0.24
HIPK3-202ENST00000379016 DEFB128Q7Z7B8 93 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ARID3BQ8IVW6 561 aaPredicted RBP13.58□□□□□ -0.24
HIPK3-202ENST00000379016 IL17REQ8NFR9 667 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 NKD1Q969G9 470 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ACAD9Q9H845 621 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ZFYVE28Q9HCC9 887 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ADGRA3Q8IWK6 1321 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 MAGEA13PA6NCF6 341 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 TMEM114B3SHH9 223 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 FCHO1O14526 889 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 TRIM66O15016 1216 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 FARP2O94887 1054 aaPredicted RBP13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ATP1A3P13637 1013 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms