RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 ARCQ7LC44 396 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 TRIM42Q8IWZ5 723 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 TEX9Q8N6V9 391 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 LRRC52Q8N7C0 313 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 HTR3CQ8WXA8 447 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 ARNTL2Q8WYA1 636 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 NDRG1Q92597 394 aaKnown RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 EBF4Q9BQW3 602 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 ADAMTS10Q9H324 1103 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 TMPRSS4Q9NRS4 437 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 HBS1LQ9Y450 684 aaKnown RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 B2RBV5 119 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 LMNAP02545 664 aaKnown RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 ENO1P06733 434 aaKnown RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 ZFXP17010 805 aaPredicted RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 PITX1P78337 314 aaPredicted RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 NIPAL4Q0D2K0 466 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 BST2Q10589 180 aaKnown RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 DCAF4L1Q3SXM0 396 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 CMPK2Q5EBM0 449 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 MDH1BQ5I0G3 518 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 ATG14Q6ZNE5 492 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 ZNF410Q86VK4 478 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 CRYBG2Q8N1P7 616 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 PDCD7Q8N8D1 485 aaKnown RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 RBM15BQ8NDT2 890 aaKnown RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 SHCBP1Q8NEM2 672 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 PPP1R13LQ8WUF5 828 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 DEPDC1BQ8WUY9 529 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 MCUR1Q96AQ8 359 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 ZNF778Q96MU6 729 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 NMRK1Q9NWW6 199 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 PPARGC1AQ9UBK2 798 aaKnown RBP11.28□□□□□ -0.6
BEST1-201ENST00000378043 PSAT1Q9Y617 370 aa11.28□□□□□ -0.6
BEST1-201ENST00000378043 A0A0A0MRY4 1105 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 DCAF8L1A6NGE4 600 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 H3BRJ5 948 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 BIRC5O15392 142 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 TOMM70O94826 608 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 SNAI1O95863 264 aaPredicted RBP11.27□□□□□ -0.61
BEST1-201ENST00000378043 SERPINB9P50453 376 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 SESN3P58005 492 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 IRX4P78413 519 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 OTUD1Q5VV17 481 aaPredicted RBP11.27□□□□□ -0.61
BEST1-201ENST00000378043 C16orf46Q6P387 395 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 FASTKD5Q7L8L6 764 aaKnown RBP11.27□□□□□ -0.61
BEST1-201ENST00000378043 FAM131BQ86XD5 332 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 CDCA5Q96FF9 252 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 ZNF333Q96JL9 665 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 SPATA13Q96N96 652 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 CCDC106Q9BWC9 280 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 NXF3Q9H4D5 531 aaKnown RBP11.27□□□□□ -0.61
BEST1-201ENST00000378043 VTA1Q9NP79 307 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 SETD4Q9NVD3 440 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 A6NHS1 94 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 LIN7AO14910 233 aaPredicted RBP11.27□□□□□ -0.61
BEST1-201ENST00000378043 ITM2AO43736 263 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 KIF1CO43896 1103 aaKnown RBP11.27□□□□□ -0.61
BEST1-201ENST00000378043 MFSD11O43934 449 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 PSMG1O95456 288 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 PRKCGP05129 697 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 AKAP5P24588 427 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 TKTP29401 623 aaKnown RBP11.27□□□□□ -0.61
BEST1-201ENST00000378043 SCNN1AP37088 669 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 BCAT1P54687 386 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 CDK18Q07002 472 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 SNX30Q5VWJ9 437 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 SLC27A1Q6PCB7 646 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 MARK2Q7KZI7 788 aaKnown RBP11.27□□□□□ -0.61
BEST1-201ENST00000378043 RAB3IL1Q8TBN0 382 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 SLC2A14Q8TDB8 520 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 TFB1MQ8WVM0 346 aaKnown RBP11.27□□□□□ -0.61
BEST1-201ENST00000378043 DNAJC9Q8WXX5 260 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 CEP41Q9BYV8 373 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.27□□□□□ -0.61
BEST1-201ENST00000378043 PLA2G4CQ9UP65 541 aa11.27□□□□□ -0.61
BEST1-201ENST00000378043 TSC2P49815 1807 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 TRIP12Q14669 1992 aaPredicted RBP11.26□□□□□ -0.61
BEST1-201ENST00000378043 PIRO00625 290 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 CAPN9O14815 690 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 GPR32O75388 356 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 RECQL4O94761 1208 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 LUC7L3O95232 432 aaKnown RBP11.26□□□□□ -0.61
BEST1-201ENST00000378043 DESP17661 470 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 PGM1P36871 562 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 RAP1GDS1P52306 607 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 SNX16P57768 344 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 STX3Q13277 289 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 TUBB3Q13509 450 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 PDE1CQ14123 709 aaPredicted RBP11.26□□□□□ -0.61
BEST1-201ENST00000378043 TTLL12Q14166 644 aaPredicted RBP11.26□□□□□ -0.61
BEST1-201ENST00000378043 FASTKD1Q53R41 847 aaKnown RBP11.26□□□□□ -0.61
BEST1-201ENST00000378043 MBLAC2Q68D91 279 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 STRADAQ7RTN6 431 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 TMPRSS6Q8IU80 811 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 CRLF3Q8IUI8 442 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 TP53INP2Q8IXH6 220 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 COLGALT1Q8NBJ5 622 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 SMC1BQ8NDV3 1235 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms