RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 CCT8L1PA6NM43 557 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 RNF103O00237 685 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 TRUB2O95900 331 aaKnown RBP20.2■□□□□ 0.82
PCDH8-202ENST00000377942 CSH1P0DML2 217 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 CSH2P0DML3 217 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 PGAM1P18669 254 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 PPM1AP35813 382 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 GP5P40197 560 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 CD151P48509 253 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 NSL1Q96IY1 281 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 GPAMQ9HCL2 828 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 FAM105AQ9NUU6 356 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 UBA2Q9UBT2 640 aaPredicted RBP20.2■□□□□ 0.82
PCDH8-202ENST00000377942 AURKCQ9UQB9 309 aa20.2■□□□□ 0.82
PCDH8-202ENST00000377942 F8VP50 259 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 MPOP05164 745 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 ARF4P18085 180 aaPredicted RBP20.19■□□□□ 0.82
PCDH8-202ENST00000377942 RAD23BP54727 409 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 LPCAT1Q8NF37 534 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 ST6GALNAC4Q9H4F1 302 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 B2RBV5 119 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 DARSP14868 501 aaKnown RBP20.19■□□□□ 0.82
PCDH8-202ENST00000377942 HNRNPH3P31942 346 aaKnown RBP20.19■□□□□ 0.82
PCDH8-202ENST00000377942 NAB1Q13506 487 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 ECM1Q16610 540 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 SHROOM1Q2M3G4 852 aaPredicted RBP20.19■□□□□ 0.82
PCDH8-202ENST00000377942 DSG4Q86SJ6 1040 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 EIF1ADQ8N9N8 165 aaKnown RBP20.19■□□□□ 0.82
PCDH8-202ENST00000377942 OR5B17Q8NGF7 314 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 ADAM32Q8TC27 787 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 HECTD3Q5T447 861 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 CACHD1Q5VU97 1274 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 ZNF662Q6ZS27 426 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 PIGZQ86VD9 579 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 NAF1Q96HR8 494 aaKnown RBP20.19■□□□□ 0.82
PCDH8-202ENST00000377942 KCND1Q9NSA2 647 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 NCANO14594 1321 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 CSE1LP55060 971 aaKnown RBP20.19■□□□□ 0.82
PCDH8-202ENST00000377942 CDK16Q00536 496 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 USP41Q3LFD5 358 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 SGO1Q5FBB7 561 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 ACBD5Q5T8D3 534 aaPredicted RBP20.19■□□□□ 0.82
PCDH8-202ENST00000377942 LRRC49Q8IUZ0 686 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 OR9Q1Q8NGQ5 310 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 DNAJC18Q9H819 358 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 GGT7Q9UJ14 662 aa20.19■□□□□ 0.82
PCDH8-202ENST00000377942 AIM2O14862 343 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 B4GALT4O60513 344 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 EFCAB14O75071 495 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 DUSP11O75319 330 aaKnown RBP20.18■□□□□ 0.82
PCDH8-202ENST00000377942 MAPK1P28482 360 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 GRTP1Q5TC63 336 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 SLC22A9Q8IVM8 553 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 ZNF333Q96JL9 665 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 LNPEPQ9UIQ6 1025 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 OPLAHO14841 1288 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 ELK3P41970 407 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 NKX2-3Q8TAU0 364 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 MDM1Q8TC05 714 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 HELQQ8TDG4 1101 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 BAP1Q92560 729 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 UBP1Q9NZI7 540 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 NCKIPSDQ9NZQ3 722 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 ATRNL1Q5VV63 1379 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 A0A0G2JLL6 359 aaPredicted RBP20.18■□□□□ 0.82
PCDH8-202ENST00000377942 O00370 1275 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 PDPK2PQ6A1A2 396 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 PRRT2Q7Z6L0 340 aaPredicted RBP20.18■□□□□ 0.82
PCDH8-202ENST00000377942 LONP2Q86WA8 852 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 PHTF1Q9UMS5 762 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 B4GALT5O43286 388 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 TSPAN3O60637 253 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 PARP6Q2NL67 630 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 TMEM259Q4ZIN3 620 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 PRPF39Q86UA1 669 aaKnown RBP20.18■□□□□ 0.82
PCDH8-202ENST00000377942 SPATA17Q96L03 361 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 ZCCHC2Q9C0B9 1178 aaKnown RBP20.18■□□□□ 0.82
PCDH8-202ENST00000377942 DNPEPQ9ULA0 475 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 RAD54BQ9Y620 910 aa20.18■□□□□ 0.82
PCDH8-202ENST00000377942 OR6C75A6NL08 312 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 PARNO95453 639 aaKnown RBP20.17■□□□□ 0.82
PCDH8-202ENST00000377942 EEF1DP29692 281 aaKnown RBP20.17■□□□□ 0.82
PCDH8-202ENST00000377942 SEC24CP53992 1094 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 PDE1CQ14123 709 aaPredicted RBP20.17■□□□□ 0.82
PCDH8-202ENST00000377942 SELENONQ9NZV5 590 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 CAND2O75155 1236 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 TPBGLP0DKB5 382 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 ITGA7Q13683 1181 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 NUP93Q8N1F7 819 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 FIBCD1Q8N539 461 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 SRPK1Q96SB4 655 aaKnown RBP20.17■□□□□ 0.82
PCDH8-202ENST00000377942 CPA3P15088 417 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 FBXW4P57775 412 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 FMO1Q01740 532 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 SMARCB1Q12824 385 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 CAMK2GQ13555 558 aaPredicted RBP20.17■□□□□ 0.82
PCDH8-202ENST00000377942 POU6F1Q14863 301 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 SYNDIG1Q9H7V2 258 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 OR12D3Q9UGF7 316 aa20.17■□□□□ 0.82
PCDH8-202ENST00000377942 DNMT3LQ9UJW3 386 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms