RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 PDCD6IPQ8WUM4 868 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 SKA2Q8WVK7 121 aaPredicted RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 COPS7BQ9H9Q2 264 aaPredicted RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 RSL24D1Q9UHA3 163 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 LZTS1Q9Y250 596 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 LRP6O75581 1613 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 TCRBV9S1A1TA0A576 114 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 SUPT3HB4E1H0 165 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 TRIM38O00635 465 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 PEX11AO75192 247 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 GNL1P36915 607 aaPredicted RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 ZNF143P52747 638 aaPredicted RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 HMGCS2P54868 508 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 BST2Q10589 180 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 CMPK2Q5EBM0 449 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 APOBEC3HQ6NTF7 200 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 LAYNQ6UX15 382 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 EP400NLQ6ZTU2 488 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 ANKS1BQ7Z6G8 1248 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 TSPAN14Q8NG11 270 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 NAT14Q8WUY8 206 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 ULK4Q96C45 1275 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 OSBPL11Q9BXB4 747 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 WDR41Q9HAD4 459 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 FBXO6Q9NRD1 293 aaPredicted RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 RGSL1A5PLK6 1076 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 TMEM191CA6NGB0 347 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 VPS4BO75351 444 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 FBXO21O94952 628 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 ERBB2P04626 1255 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 CHRNB2P17787 502 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 MGAT1P26572 445 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 C21orf59P57076 290 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 GRM1Q13255 1194 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 TIGD7Q6NT04 549 aaPredicted RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 NT5DC4Q86YG4 428 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 ENDOVQ8N8Q3 282 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 ADCY4Q8NFM4 1077 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 HELQQ8TDG4 1101 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 ZNF570Q96NI8 536 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 C17orf80Q9BSJ5 609 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 EPS8L2Q9H6S3 715 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 FBXO28Q9NVF7 368 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 TRHDEQ9UKU6 1024 aa9□□□□□ -0.97
PCDH9-202ENST00000377865 R3HDM2Q9Y2K5 976 aaKnown RBP9□□□□□ -0.97
PCDH9-202ENST00000377865 UBA6A0AVT1 1052 aaPredicted RBP8.99□□□□□ -0.97
PCDH9-202ENST00000377865 NPM3O75607 178 aaKnown RBP8.99□□□□□ -0.97
PCDH9-202ENST00000377865 AVPR1AP37288 418 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 OAZ1P54368 228 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 ZACNQ401N2 412 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 SEZ6Q53EL9 994 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 ZNF484Q5JVG2 852 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 KCNMB4Q86W47 210 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 PPP1R14BQ96C90 147 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 SLC25A23Q9BV35 468 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 QTRT2Q9H974 415 aaKnown RBP8.99□□□□□ -0.97
PCDH9-202ENST00000377865 PNPLA3Q9NST1 481 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 GGA3Q9NZ52 723 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 ZNRF3Q9ULT6 936 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 PSMD13Q9UNM6 376 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.99□□□□□ -0.97
PCDH9-202ENST00000377865 A0A096LPK6 155 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 BANF1O75531 89 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 RBL1P28749 1068 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 TGFB2P61812 414 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 MSLNQ13421 630 aaPredicted RBP8.99□□□□□ -0.97
PCDH9-202ENST00000377865 SQLEQ14534 574 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 DGKDQ16760 1214 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 TAF2Q6P1X5 1199 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 CLVS1Q8IUQ0 354 aaPredicted RBP8.99□□□□□ -0.97
PCDH9-202ENST00000377865 IPMKQ8NFU5 416 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 CERKQ8TCT0 537 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 ATG4CQ96DT6 458 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 NMRAL1Q9HBL8 299 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 ACP6Q9NPH0 428 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 SATB2Q9UPW6 733 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 ATP11BQ9Y2G3 1177 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 NR2E1Q9Y466 385 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 NFASCO94856 1347 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 IGKV6D-41A0A0C4DH26 115 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 GOLGA8TH3BQL2 631 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 BCL10O95999 233 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 PYGLP06737 847 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 TPP2P29144 1249 aaPredicted RBP8.99□□□□□ -0.97
PCDH9-202ENST00000377865 CDK18Q07002 472 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 FASTKQ14296 549 aaKnown RBP8.99□□□□□ -0.97
PCDH9-202ENST00000377865 INSCQ1MX18 579 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 SLC5A9Q2M3M2 681 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 AGBL3Q8NEM8 1001 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 USP33Q8TEY7 942 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 ZFAND2BQ8WV99 257 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 CASP10Q92851 521 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 SHISA4Q96DD7 197 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 ZNF668Q96K58 619 aaPredicted RBP8.99□□□□□ -0.97
PCDH9-202ENST00000377865 ASB2Q96Q27 587 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 EBNA1BP2Q99848 306 aaKnown RBP8.99□□□□□ -0.97
PCDH9-202ENST00000377865 C1orf50Q9BV19 199 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 PALMDQ9NP74 551 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 ERAP1Q9NZ08 941 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 LRRC42Q9Y546 428 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms