RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 LIASO43766 372 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 CYP24A1Q07973 514 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PICALMQ13492 652 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 VTA1Q9NP79 307 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 MAGED2Q9UNF1 606 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 SH3BP5O60239 455 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ONECUT3O60422 494 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ERFEQ4G0M1 354 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 C11orf88Q6PI97 169 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 AP3S1Q92572 193 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 TAS2R13Q9NYV9 303 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ERP27Q96DN0 273 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 DPH5Q9H2P9 285 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PBRM1Q86U86 1689 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 SASH3O75995 380 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ALAS1P13196 640 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 GSTM5P46439 218 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PTDSS1P48651 473 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PTK2BQ14289 1009 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ZUFSPQ96AP4 578 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 SPATA9Q9BWV2 254 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 SPATA31A5Q5VU36 1347 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 SPATA31A7Q8IWB4 1347 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 GSC2O15499 205 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PRKAB2O43741 272 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 TAF12Q16514 161 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 FAM133BQ5BKY9 247 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 DCLK2Q8N568 766 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 AURKBQ96GD4 344 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 BIRC8Q96P09 236 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 FSD1LQ9BXM9 530 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ITGB6P18564 788 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 MAGEA6P43360 314 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 WDR72Q3MJ13 1102 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 EPS8L1Q8TE68 723 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 TTC36A6NLP5 189 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 H7C4K7 107 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ELOAQ14241 798 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 KRT74Q7RTS7 529 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 GPR141Q7Z602 305 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 KRCC1Q9NPI7 259 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 XPO7Q9UIA9 1087 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 CFAP99D6REC4 459 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 CALCAP01258 141 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 UAP1Q16222 522 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PLA2G4EQ3MJ16 856 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ZBTB9Q96C00 473 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 A3GALT2U3KPV4 340 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 H0YAE9 185 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 KRT19P08727 400 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ETV6P41212 452 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PRICKLE1Q96MT3 831 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 WDR12Q9GZL7 423 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 HPS4Q9NQG7 708 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ZNF510Q9Y2H8 683 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 CHRNB3Q05901 458 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 GRAMD1BQ3KR37 738 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 HACD2Q6Y1H2 254 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 RAB2BQ8WUD1 216 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 DNA2P51530 1060 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ITGA8P53708 1063 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 POLE2P56282 527 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PRKG2Q13237 762 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 TRIM25Q14258 630 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 MRPL46Q9H2W6 279 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 CNGB3Q9NQW8 809 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 INTS13Q9NVM9 706 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 NPHP3-ACAD11A0A0J9YXS1 232 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 INO80B-WBP1J3KQ70 363 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 TFAMQ00059 246 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 NDUFB10O96000 172 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 TPSB2P20231 275 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 AUHQ13825 339 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 TPSAB1Q15661 275 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 DENND1BQ6P3S1 775 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ABRAXAS1Q6UWZ7 409 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PROCA1Q8NCQ7 364 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 OSBPL1AQ9BXW6 950 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 KRT36O76013 467 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PDGFRBP09619 1106 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 SKP1P63208 163 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 PDCD4Q53EL6 469 aaKnown RBP5.07□□□□□ -1.6
PCDH9-201ENST00000377861 COQ7Q99807 217 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ATXN10Q9UBB4 475 aa5.07□□□□□ -1.6
PCDH9-201ENST00000377861 ZNF467Q7Z7K2 595 aaPredicted RBP5.06□□□□□ -1.6
PCDH9-201ENST00000377861 MYDGFQ969H8 173 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 C1orf74Q96LT6 269 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 IL17RBQ9NRM6 502 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 TJP2Q9UDY2 1190 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 PSME2Q9UL46 239 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 PSMD13Q9UNM6 376 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 NRCAMQ92823 1304 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 MEIS2O14770 477 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 CAND2O75155 1236 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 ASMTLO95671 621 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 SCYL2Q6P3W7 929 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 PLIN2Q99541 437 aa5.06□□□□□ -1.6
PCDH9-201ENST00000377861 KLF6Q99612 283 aaPredicted RBP5.06□□□□□ -1.6
PCDH9-201ENST00000377861 FBXO28Q9NVF7 368 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms