RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 ADGRF2Q8IZF7 708 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 PPTC7Q8NI37 304 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 TEKT4Q8WW24 435 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 THTPAQ9BU02 230 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 OSBPL1AQ9BXW6 950 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 TRAFD1O14545 582 aaPredicted RBP16.76■□□□□ 0.27
TRIM27-202ENST00000377199 CITO14578 2027 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 TPP1O14773 563 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 ITM2AO43736 263 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 IGFBP6P24592 240 aaPredicted RBP16.76■□□□□ 0.27
TRIM27-202ENST00000377199 PSMB4P28070 264 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 GJA5P36382 358 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 STX3Q13277 289 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 FASTKD1Q53R41 847 aaKnown RBP16.76■□□□□ 0.27
TRIM27-202ENST00000377199 WASHC2DQ5SRD0 308 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 PRAMEF19Q5SWL8 479 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 MAMDC4Q6UXC1 1216 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 POU5F2Q8N7G0 328 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 ZNF358Q9NW07 568 aa16.76■□□□□ 0.27
TRIM27-202ENST00000377199 PRR5-ARHGAP8B1AHC4 643 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 RNF103O00237 685 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 TKTP29401 623 aaKnown RBP16.75■□□□□ 0.27
TRIM27-202ENST00000377199 ARHGAP8P85298 464 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 BST2Q10589 180 aaKnown RBP16.75■□□□□ 0.27
TRIM27-202ENST00000377199 FBXO47Q5MNV8 452 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 N4BP2L1Q5TBK1 243 aaPredicted RBP16.75■□□□□ 0.27
TRIM27-202ENST00000377199 C9orf57Q5W0N0 161 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 RBM15BQ8NDT2 890 aaKnown RBP16.75■□□□□ 0.27
TRIM27-202ENST00000377199 OR6J1Q8NGC5 347 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 FBXO41Q8TF61 875 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 DCLRE1BQ9H816 532 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 WASF2Q9Y6W5 498 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 DCAF8L1A6NGE4 600 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 DPYSL4O14531 572 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 SMPD1P17405 629 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 STILQ15468 1287 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 DPYSL2Q16555 572 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 SLC27A1Q6PCB7 646 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 LINC01465Q8N7H1 131 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 RTP4Q96DX8 246 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 APOL2Q9BQE5 337 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 PNPLA8Q9NP80 782 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.75■□□□□ 0.27
TRIM27-202ENST00000377199 TXNDC16Q9P2K2 825 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 PCDHA11Q9Y5I1 949 aa16.75■□□□□ 0.27
TRIM27-202ENST00000377199 TRDMT1O14717 391 aaKnown RBP16.74■□□□□ 0.27
TRIM27-202ENST00000377199 SLC8A3P57103 927 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 SNX30Q5VWJ9 437 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 FASTKD5Q7L8L6 764 aaKnown RBP16.74■□□□□ 0.27
TRIM27-202ENST00000377199 CMC1Q7Z7K0 106 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 GPRC5AQ8NFJ5 357 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 CFAP61Q8NHU2 1237 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 SHKBP1Q8TBC3 707 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 DNAJC9Q8WXX5 260 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 SNX27Q96L92 541 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 NMRK1Q9NWW6 199 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 KPNA7A9QM74 516 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 DYNC1LI2O43237 492 aaPredicted RBP16.74■□□□□ 0.27
TRIM27-202ENST00000377199 BEST1O76090 585 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 TGDSO95455 350 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 BCAT1P54687 386 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 PIGZQ86VD9 579 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 KBTBD7Q8WVZ9 684 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 AZIN2Q96A70 460 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 P2RY11Q96G91 374 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 DNAJC16Q9Y2G8 782 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 FAM159BA6NKW6 160 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 GOLGA8TH3BQL2 631 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 M0QYT0 321 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 TBX10O75333 385 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 GCATO75600 419 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 BPGMP07738 259 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 SAT1P21673 171 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 PGGT1BP53609 377 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 PPIL2Q13356 520 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 VWA5B1Q5TIE3 1220 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 PID1Q7Z2X4 250 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 MAB21L3Q8N8X9 362 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 DNAJB3Q8WWF6 145 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 MOCOSQ96EN8 888 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 PPP1R36Q96LQ0 422 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 QKIQ96PU8 341 aaKnown RBP eCLIP16.74■□□□□ 0.275e-14■■■■■ 46.2
TRIM27-202ENST00000377199 WWP1Q9H0M0 922 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 XAB2Q9HCS7 855 aaKnown RBP16.74■□□□□ 0.27
TRIM27-202ENST00000377199 SYBUQ9NX95 663 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 ZNF180Q9UJW8 692 aa16.74■□□□□ 0.27
TRIM27-202ENST00000377199 ADCY6O43306 1168 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 BAG2O95816 211 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 ALDOAP04075 364 aaKnown RBP16.73■□□□□ 0.27
TRIM27-202ENST00000377199 OCRLQ01968 901 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 PEX6Q13608 980 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 SYPL2Q5VXT5 272 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 TNS4Q8IZW8 715 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 ANKRD52Q8NB46 1076 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 NRG4Q8WWG1 115 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 MED10Q9BTT4 135 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 GCOM2Q9BZD3 368 aaPredicted RBP16.73■□□□□ 0.27
TRIM27-202ENST00000377199 XPNPEP3Q9NQH7 507 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 ARHGEF4Q9NR80 690 aa16.73■□□□□ 0.27
TRIM27-202ENST00000377199 ZFATQ9P243 1243 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms