RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ALDH9A1P49189 494 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 PRKAA1Q13131 559 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 CCNG2Q16589 344 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 FIGNQ5HY92 759 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 CENPLQ8N0S6 344 aaPredicted RBP13.97□□□□□ -0.17
GPC6-201ENST00000377047 ACTL9Q8TC94 416 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 TADA1Q96BN2 335 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 UROC1Q96N76 676 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 CORO1BQ9BR76 489 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 POPDC2Q9HBU9 364 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 NDOR1Q9UHB4 597 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 CYP3A4P08684 503 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 PTPN3P26045 913 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 COPAP53621 1224 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 PLD3Q8IV08 490 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 SYTL1Q8IYJ3 562 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 FIBCD1Q8N539 461 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 UBA2Q9UBT2 640 aaPredicted RBP13.97□□□□□ -0.17
GPC6-201ENST00000377047 TRAV19A0A0A6YYK7 116 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 TFE3P19532 575 aaPredicted RBP13.97□□□□□ -0.17
GPC6-201ENST00000377047 STX5Q13190 355 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 ITGA9Q13797 1035 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 PABPC1LQ4VXU2 614 aaKnown RBP13.97□□□□□ -0.17
GPC6-201ENST00000377047 KIAA0319LQ8IZA0 1049 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 PABPC3Q9H361 631 aaKnown RBP13.97□□□□□ -0.17
GPC6-201ENST00000377047 MORC2Q9Y6X9 1032 aaPredicted RBP13.97□□□□□ -0.17
GPC6-201ENST00000377047 ADGRB1O14514 1584 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 RASSF9O75901 435 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 GSNP06396 782 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 ATP5BP06576 529 aaKnown RBP13.97□□□□□ -0.17
GPC6-201ENST00000377047 LSP1P33241 339 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 SLC9A5Q14940 896 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 BTNL9Q6UXG8 535 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 ADCK1Q86TW2 530 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 LPPQ93052 612 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 OLFM3Q96PB7 478 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 MIEF1Q9NQG6 463 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 ABCC13Q9NSE7 274 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 KLC4Q9NSK0 619 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 MAP10Q9P2G4 905 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 HES2Q9Y543 173 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 GAKO14976 1311 aa13.97□□□□□ -0.17
GPC6-201ENST00000377047 LTFP02788 710 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 PTPN1P18031 435 aaKnown RBP13.96□□□□□ -0.17
GPC6-201ENST00000377047 CDH17Q12864 832 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 IRAK1BP1Q5VVH5 260 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 CERS5Q8N5B7 392 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 MARCH2Q9P0N8 246 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 E5RJQ4 531 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 MTA2O94776 668 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 HIRAP54198 1017 aaPredicted RBP13.96□□□□□ -0.17
GPC6-201ENST00000377047 KIF2BQ8N4N8 673 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 TBL1YQ9BQ87 522 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 SYNPO2Q9UMS6 1093 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.96□□□□□ -0.17
GPC6-201ENST00000377047 TISP43B9A030 160 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 SP100P23497 879 aaPredicted RBP13.96□□□□□ -0.17
GPC6-201ENST00000377047 NOMO2Q5JPE7 1267 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 HTR3CQ8WXA8 447 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 OMDQ99983 421 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 ARHGAP20Q9P2F6 1191 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 BLOC1S6Q9UL45 172 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 WDR27A2RRH5 827 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 AGRPO00253 132 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 KATNA1O75449 491 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 OR56A5P0C7T3 313 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 CNTFP26441 200 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 ATP5C1P36542 298 aaKnown RBP13.96□□□□□ -0.17
GPC6-201ENST00000377047 SERPINB10P48595 397 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 GCNT1Q02742 428 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 TRIP10Q15642 601 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 FBXL19Q6PCT2 694 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 PLEKHM3Q6ZWE6 761 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 P3H2Q8IVL5 708 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 NLNQ9BYT8 704 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 TMEM134Q9H6X4 195 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 ZMYM2Q9UBW7 1377 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 PHTF1Q9UMS5 762 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 SNX8Q9Y5X2 465 aa13.96□□□□□ -0.17
GPC6-201ENST00000377047 SF3B1O75533 1304 aaKnown RBP eCLIP13.96□□□□□ -0.188e-6■■■■■ 107
GPC6-201ENST00000377047 MAGEB16A2A368 324 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 SCAMP3O14828 347 aaKnown RBP13.96□□□□□ -0.18
GPC6-201ENST00000377047 ZW10O43264 779 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 BMPR2Q13873 1038 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 SETMARQ53H47 684 aaPredicted RBP13.96□□□□□ -0.18
GPC6-201ENST00000377047 VSIG10LQ86VR7 867 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 ACTRT1Q8TDG2 376 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 SMAD5Q99717 465 aaKnown RBP13.96□□□□□ -0.18
GPC6-201ENST00000377047 YIPF3Q9GZM5 350 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 EXOSC4Q9NPD3 245 aaKnown RBP13.96□□□□□ -0.18
GPC6-201ENST00000377047 SCN3BQ9NY72 215 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 NR5A2O00482 541 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 MGAT5Q09328 741 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 NLRP9Q7RTR0 991 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 REXO1L1PQ8IX06 675 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 C1QTNF7Q9BXJ2 289 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 ASAH2Q9NR71 780 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 LRRC4BQ9NT99 713 aa13.96□□□□□ -0.18
GPC6-201ENST00000377047 NDUFS2O75306 463 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 TPBGLP0DKB5 382 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms