RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 TOP3BO95985 862 aaKnown RBP10.07□□□□□ -0.8
C9orf85-202ENST00000377027 HLA-DRAP01903 254 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 NR3C1P04150 777 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 TRIM49P0CI25 452 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 TRIM49CP0CI26 452 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 GBP1P32455 592 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 PTGER3P43115 390 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 TUBP50607 506 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 MAP3K7CLP57077 242 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 IRX4P78413 519 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 SHC2P98077 582 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 PPP3CAQ08209 521 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 INCA1Q0VD86 236 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 NAA30Q147X3 362 aaPredicted RBP10.07□□□□□ -0.8
C9orf85-202ENST00000377027 ELF2Q15723 593 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 HECTD3Q5T447 861 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 PSAPL1Q6NUJ1 521 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 C16orf46Q6P387 395 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 LYPD4Q6UWN0 246 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 PDZD8Q8NEN9 1154 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 ACOX2Q99424 681 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 MED10Q9BTT4 135 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 GOLPH3LQ9H4A5 285 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 FSCN3Q9NQT6 498 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 ARHGEF4Q9NR80 690 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 SPHK2Q9NRA0 654 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 CACNA1EQ15878 2313 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 ITPR1Q14643 2758 aa10.07□□□□□ -0.8
C9orf85-202ENST00000377027 ATXN2Q99700 1313 aaKnown RBP10.07□□□□□ -0.8
C9orf85-202ENST00000377027 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 PRRT4C9JH25 899 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 PDXKO00764 312 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 SLC9A3R1O14745 358 aaPredicted RBP10.06□□□□□ -0.8
C9orf85-202ENST00000377027 TLR5O60602 858 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 PHACTR2O75167 634 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 RHOBTB1O94844 696 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 APODP05090 189 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 CELA2BP08218 269 aaPredicted RBP10.06□□□□□ -0.8
C9orf85-202ENST00000377027 GABRG2P18507 467 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 ADORA2BP29275 332 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 GRIA2P42262 883 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 TNFRSF4P43489 277 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 ST3GAL2Q16842 350 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 ZCWPW2Q504Y3 356 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 USP39Q53GS9 565 aaKnown RBP10.06□□□□□ -0.8
C9orf85-202ENST00000377027 PEAR1Q5VY43 1037 aaPredicted RBP10.06□□□□□ -0.8
C9orf85-202ENST00000377027 EGFLAMQ63HQ2 1017 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 KIAA1211LQ6NV74 962 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 TOGARAM2Q6ZUX3 1019 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 ARMCX6Q7L4S7 300 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 SCD5Q86SK9 330 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 DDX42Q86XP3 938 aaKnown RBP eCLIP10.06□□□□□ -0.8
C9orf85-202ENST00000377027 TMEFF1Q8IYR6 380 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 TERB1Q8NA31 727 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 TAS1R2Q8TE23 839 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 EXOC4Q96A65 974 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 ERLEC1Q96DZ1 483 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 EXOC1Q9NV70 894 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 FAM13BQ9NYF5 915 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 EHD2Q9NZN4 543 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 NUDT5Q9UKK9 219 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 TRAF3IP3Q9Y228 551 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 PCNX2A6NKB5 2137 aa10.06□□□□□ -0.8
C9orf85-202ENST00000377027 SMG1Q96Q15 3661 aaKnown RBP10.05□□□□□ -0.8
C9orf85-202ENST00000377027 A0A1W2PQH9 124 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 TCRBV21S2A2A0A5A6 115 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 KLKB1P03952 638 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 RPN1P04843 607 aaKnown RBP10.05□□□□□ -0.8
C9orf85-202ENST00000377027 CISD3P0C7P0 127 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 SPINK2P20155 84 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 WASP42768 502 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 DHPSP49366 369 aaPredicted RBP10.05□□□□□ -0.8
C9orf85-202ENST00000377027 NDUFA8P51970 172 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 AP3M2P53677 418 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 GAD2Q05329 585 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 SGSM1Q2NKQ1 1148 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 HTR3DQ70Z44 454 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 TTC30AQ86WT1 665 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 CEP57L1Q8IYX8 460 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 GOLGA5Q8TBA6 731 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 HMGB4Q8WW32 186 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 DDX1Q92499 740 aaKnown RBP10.05□□□□□ -0.8
C9orf85-202ENST00000377027 SEMA4DQ92854 862 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 JAKMIP2Q96AA8 810 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 OTUB2Q96DC9 234 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 IFT43Q96FT9 208 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 TNIP3Q96KP6 325 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 HNRNPABQ99729 332 aaKnown RBP10.05□□□□□ -0.8
C9orf85-202ENST00000377027 SLC6A17Q9H1V8 727 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.05□□□□□ -0.8
C9orf85-202ENST00000377027 COMMD8Q9NX08 183 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 TBC1D14Q9P2M4 693 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 ANGPTL2Q9UKU9 493 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 MAPK8IP1Q9UQF2 711 aa10.05□□□□□ -0.8
C9orf85-202ENST00000377027 TP53BP1Q12888 1972 aaPredicted RBP10.05□□□□□ -0.8
C9orf85-202ENST00000377027 IKBKBO14920 756 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 CACNG3O60359 315 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 CILPO75339 1184 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 RHOBTB3O94955 611 aa10.04□□□□□ -0.8
C9orf85-202ENST00000377027 PDIA4P13667 645 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms