RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 MPP7Q5T2T1 576 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 BSPRYQ5W0U4 402 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 NUGGCQ68CJ6 796 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 FOXR2Q6PJQ5 311 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 IL27RAQ6UWB1 636 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 TMPRSS6Q8IU80 811 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 FMNL3Q8IVF7 1028 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 CCDC117Q8IWD4 279 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-204ENST00000376643 UNC45BQ8IWX7 931 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 ELOA2Q8IYF1 753 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-204ENST00000376643 MINDY1Q8N5J2 469 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 IRGQQ8WZA9 623 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 TATDN2Q93075 761 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 EEF2KMTQ96G04 330 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 PIWIL1Q96J94 861 aaKnown RBP15.41■□□□□ 0.06
HDAC6-204ENST00000376643 NUP58Q9BVL2 599 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 ITM2CQ9NQX7 267 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 STOML2Q9UJZ1 356 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 CHD8Q9HCK8 2581 aa15.41■□□□□ 0.06
HDAC6-204ENST00000376643 BICDL2A1A5D9 508 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 O00370 1275 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 GIPC1O14908 333 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 KRT37O76014 449 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 FBXO21O94952 628 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 IGLV3-19P01714 112 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 ATP5BP06576 529 aaKnown RBP15.4■□□□□ 0.06
HDAC6-204ENST00000376643 IL12RB1P42701 662 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 SLC11A2P49281 568 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 SFSWAPQ12872 951 aaKnown RBP15.4■□□□□ 0.06
HDAC6-204ENST00000376643 GEN1Q17RS7 908 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 CCDC40Q4G0X9 1142 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 ADGRF1Q5T601 910 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 ANKRD40Q6AI12 368 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 LCLAT1Q6UWP7 414 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 PIP4P1Q86T03 277 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 AHI1Q8N157 1196 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 SPATA20Q8TB22 786 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 SLC35C1Q96A29 364 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 TMA16Q96EY4 203 aaKnown RBP15.4■□□□□ 0.06
HDAC6-204ENST00000376643 TOE1Q96GM8 510 aaKnown RBP15.4■□□□□ 0.06
HDAC6-204ENST00000376643 GDPD2Q9HCC8 539 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 WSB2Q9NYS7 404 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-204ENST00000376643 NEUROG3Q9Y4Z2 214 aa15.4■□□□□ 0.06
HDAC6-204ENST00000376643 MAP1BP46821 2468 aaKnown RBP15.4■□□□□ 0.06
HDAC6-204ENST00000376643 TNRC6BQ9UPQ9 1833 aaKnown RBP15.4■□□□□ 0.06
HDAC6-204ENST00000376643 GNA14O95837 355 aa15.39■□□□□ 0.05
HDAC6-204ENST00000376643 EPHX1P07099 455 aa15.39■□□□□ 0.05
HDAC6-204ENST00000376643 NCAM1P13591 858 aa15.39■□□□□ 0.05
HDAC6-204ENST00000376643 FMO5P49326 533 aa15.39■□□□□ 0.05
HDAC6-204ENST00000376643 SIM1P81133 766 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-204ENST00000376643 ZBTB16Q05516 673 aa15.39■□□□□ 0.05
HDAC6-204ENST00000376643 ZNF234Q14588 700 aa15.39■□□□□ 0.05
HDAC6-204ENST00000376643 SLC41A1Q8IVJ1 513 aa15.39■□□□□ 0.05
HDAC6-204ENST00000376643 DEFB119Q8N690 84 aa15.39■□□□□ 0.05
HDAC6-204ENST00000376643 DNASE2BQ8WZ79 361 aa15.39■□□□□ 0.05
HDAC6-204ENST00000376643 HSFY1Q96LI6 401 aa15.39■□□□□ 0.05
HDAC6-204ENST00000376643 PCDHB9Q9Y5E1 797 aa15.39■□□□□ 0.05
HDAC6-204ENST00000376643 KMT2BQ9UMN6 2715 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-204ENST00000376643 WASH3PC4AMC7 463 aa15.38■□□□□ 0.05
HDAC6-204ENST00000376643 CER1O95813 267 aa15.38■□□□□ 0.05
HDAC6-204ENST00000376643 TPMTP51580 245 aa15.38■□□□□ 0.05
HDAC6-204ENST00000376643 DAOAP59103 153 aa15.38■□□□□ 0.05
HDAC6-204ENST00000376643 RING1Q06587 406 aa15.38■□□□□ 0.05
HDAC6-204ENST00000376643 CNGA2Q16280 664 aa15.38■□□□□ 0.05
HDAC6-204ENST00000376643 TTC31Q49AM3 519 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-204ENST00000376643 FNDC3BQ53EP0 1204 aaKnown RBP15.38■□□□□ 0.05
HDAC6-204ENST00000376643 MSANTD2Q6P1R3 559 aa15.38■□□□□ 0.05
HDAC6-204ENST00000376643 TMEM270Q6UE05 265 aa15.38■□□□□ 0.05
HDAC6-204ENST00000376643 PPM1KQ8N3J5 372 aa15.38■□□□□ 0.05
HDAC6-204ENST00000376643 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.38■□□□□ 0.05
HDAC6-204ENST00000376643 KDF1Q8NAX2 398 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-204ENST00000376643 OR2T3Q8NH03 318 aa15.38■□□□□ 0.05
HDAC6-204ENST00000376643 AZIN2Q96A70 460 aa15.38■□□□□ 0.05
HDAC6-204ENST00000376643 FAM81BQ96LP2 452 aa15.38■□□□□ 0.05
HDAC6-204ENST00000376643 MKRN2Q9H000 416 aaKnown RBP15.38■□□□□ 0.05
HDAC6-204ENST00000376643 PCDHB4Q9Y5E5 795 aa15.38■□□□□ 0.05
HDAC6-204ENST00000376643 PI4KAP42356 2102 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 YJEFN3A6XGL0 299 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 METTL12A8MUP2 240 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 E7ENQ6 273 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 M0QYV0 167 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 BCAT2O15382 392 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-204ENST00000376643 FGFR1OPO95684 399 aaKnown RBP15.37■□□□□ 0.05
HDAC6-204ENST00000376643 ZNF883P0CG24 379 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 HOXD9P28356 352 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-204ENST00000376643 GCNT1Q02742 428 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 NNTQ13423 1086 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 UBA3Q8TBC4 463 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 EDEM1Q92611 657 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 SERPINB11Q96P15 392 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 SCNM1Q9BWG6 230 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 GPR174Q9BXC1 333 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 LHX5Q9H2C1 402 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 SUN2Q9UH99 717 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 SCML1Q9UN30 329 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.37■□□□□ 0.05
HDAC6-204ENST00000376643 MSRB2Q9Y3D2 182 aa15.37■□□□□ 0.05
HDAC6-204ENST00000376643 GON4LQ3T8J9 2241 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 MED7O43513 233 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 LTFP02788 710 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms