RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 RAB6BQ9NRW1 208 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 MAGED2Q9UNF1 606 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-206ENST00000376496 H3BRJ5 948 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 HOXA2O43364 376 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 ERCC2P18074 760 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 MAGEA4P43358 317 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 LMAN1P49257 510 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 NUMBP49757 651 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 PDIA2Q13087 525 aaKnown RBP13.03□□□□□ -0.32
CLCN6-206ENST00000376496 ZBED8Q8IZ13 594 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 NUP93Q8N1F7 819 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 NPWQ8N729 165 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 FAM76AQ8TAV0 307 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 IRGQQ8WZA9 623 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 MRRFQ96E11 262 aaKnown RBP13.03□□□□□ -0.32
CLCN6-206ENST00000376496 SEPT10Q9P0V9 454 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 OR12D3Q9UGF7 316 aa13.03□□□□□ -0.32
CLCN6-206ENST00000376496 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
CLCN6-206ENST00000376496 PATJQ8NI35 1801 aa13.02□□□□□ -0.32
CLCN6-206ENST00000376496 GOLGA6L10A6NI86 522 aa13.02□□□□□ -0.32
CLCN6-206ENST00000376496 OR1D2P34982 312 aa13.02□□□□□ -0.32
CLCN6-206ENST00000376496 CXCR3P49682 368 aa13.02□□□□□ -0.32
CLCN6-206ENST00000376496 TPI1P60174 286 aa13.02□□□□□ -0.32
CLCN6-206ENST00000376496 CCDC38Q502W7 563 aa13.02□□□□□ -0.32
CLCN6-206ENST00000376496 BBOF1Q8ND07 529 aa13.02□□□□□ -0.32
CLCN6-206ENST00000376496 CCNYQ8ND76 341 aa13.02□□□□□ -0.32
CLCN6-206ENST00000376496 WDR27A2RRH5 827 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 METTL18O95568 372 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 TTC4O95801 387 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 DNAJB2P25686 324 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 IFI35P80217 286 aaPredicted RBP13.02□□□□□ -0.33
CLCN6-206ENST00000376496 CAV1Q03135 178 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 AP1B1Q10567 949 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 DPYSQ14117 519 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 NAT8LQ8N9F0 302 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 CCHCR1Q8TD31 782 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 CELF6Q96J87 481 aaKnown RBP13.02□□□□□ -0.33
CLCN6-206ENST00000376496 WDR83Q9BRX9 315 aaKnown RBP13.02□□□□□ -0.33
CLCN6-206ENST00000376496 FRMD8P1Q9BZ68 369 aaPredicted RBP13.02□□□□□ -0.33
CLCN6-206ENST00000376496 PNPLA8Q9NP80 782 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 COL4A6Q14031 1691 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 LRIG2O94898 1065 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 HMBSP08397 361 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 NUDT17P0C025 328 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 RAG1P15918 1043 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 MORF4L2Q15014 288 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 RWDD4Q6NW29 188 aaKnown RBP13.02□□□□□ -0.33
CLCN6-206ENST00000376496 MIB1Q86YT6 1006 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 PPIL6Q8IXY8 311 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.02□□□□□ -0.33
CLCN6-206ENST00000376496 FBXO22Q8NEZ5 403 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 ABCC13Q9NSE7 274 aa13.02□□□□□ -0.33
CLCN6-206ENST00000376496 OR6C75A6NL08 312 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 KCNK1O00180 336 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 IRAK2O43187 625 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 TBC1D4O60343 1298 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 EPHB2P29323 1055 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 MAGOHP61326 146 aaKnown RBP13.01□□□□□ -0.33
CLCN6-206ENST00000376496 GABPB1Q06547 395 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-206ENST00000376496 EFEMP1Q12805 493 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 TAF10Q12962 218 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 SEMA3BQ13214 749 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 BBS9Q3SYG4 887 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 SLC45A4Q5BKX6 768 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 RASIP1Q5U651 963 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 KIAA1841Q6NSI8 718 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 TOP1MTQ969P6 601 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 ARMC5Q96C12 935 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 IGSF21Q96ID5 467 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 TMEM175Q9BSA9 504 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 PRDM12Q9H4Q4 367 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 PIH1D1Q9NWS0 290 aaKnown RBP13.01□□□□□ -0.33
CLCN6-206ENST00000376496 BCLAF3A2AJT9 711 aaKnown RBP13.01□□□□□ -0.33
CLCN6-206ENST00000376496 DCLK1O15075 740 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 PAGE1O75459 146 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 STIP1P31948 543 aaKnown RBP13.01□□□□□ -0.33
CLCN6-206ENST00000376496 GPR17Q13304 367 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 VSTM1Q6UX27 236 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 DENND5BQ6ZUT9 1274 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 TRMT10CQ7L0Y3 403 aaKnown RBP13.01□□□□□ -0.33
CLCN6-206ENST00000376496 IGDCC3Q8IVU1 814 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 FBXO32Q969P5 355 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 NTAN1Q96AB6 310 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 PGAP3Q96FM1 320 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-206ENST00000376496 FUBP3Q96I24 572 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLCN6-206ENST00000376496 C8orf48Q96LL4 319 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 ETNK1Q9HBU6 452 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 TBK1Q9UHD2 729 aa13.01□□□□□ -0.33
CLCN6-206ENST00000376496 ATF6P18850 670 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 GRIA1P42261 906 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 PSMD5Q16401 504 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 HIF1AQ16665 826 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 ARL13BQ3SXY8 428 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 C1orf53Q5VUE5 145 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 OLFM3Q96PB7 478 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 QKIQ96PU8 341 aaKnown RBP eCLIP13□□□□□ -0.33
CLCN6-206ENST00000376496 SLC9A7Q96T83 725 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 TRIM56Q9BRZ2 755 aaKnown RBP13□□□□□ -0.33
CLCN6-206ENST00000376496 SHOC2Q9UQ13 582 aa13□□□□□ -0.33
CLCN6-206ENST00000376496 TRIM66O15016 1216 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms