RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 BCO2Q9BYV7 579 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 TXLNGYQ9BZA5 131 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 CAB39LQ9H9S4 337 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 ZNF232Q9UNY5 417 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 RRN3P2A6NIE6 340 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 MT-CO1P00395 513 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 GRK4P32298 578 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 SOX11P35716 441 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 MORF4L2Q15014 288 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 SPOUT1Q5T280 376 aaKnown RBP11.16□□□□□ -0.62
CXCL12-203ENST00000374429 TMCO2Q7Z6W1 182 aaPredicted RBP11.16□□□□□ -0.62
CXCL12-203ENST00000374429 CMC1Q7Z7K0 106 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 RYBPQ8N488 228 aaPredicted RBP11.16□□□□□ -0.62
CXCL12-203ENST00000374429 MSL3Q8N5Y2 521 aaKnown RBP11.16□□□□□ -0.62
CXCL12-203ENST00000374429 FITM2Q8N6M3 262 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 IPMKQ8NFU5 416 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 NAT14Q8WUY8 206 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 PABPC5Q96DU9 382 aaKnown RBP11.16□□□□□ -0.62
CXCL12-203ENST00000374429 SERAC1Q96JX3 654 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 KLC4Q9NSK0 619 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 PIGVQ9NUD9 493 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 GRID1Q9ULK0 1009 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 PADI3Q9ULW8 664 aa11.16□□□□□ -0.62
CXCL12-203ENST00000374429 LOC100653049A0A140TA62 436 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 RNF103O00237 685 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 KRT34O76011 436 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 PIRTP0C851 137 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 BCAT1P54687 386 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 MAXP61244 160 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 TAP1Q03518 808 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 KCNA10Q16322 511 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 DBN1Q16643 649 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 BOLA3Q53S33 107 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 EFHC2Q5JST6 749 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 ANKRD20A3Q5VUR7 823 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 RHBDF2Q6PJF5 856 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 OLFML1Q6UWY5 402 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 ISLR2Q6UXK2 745 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 RINLQ6ZS11 566 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 DEFB128Q7Z7B8 93 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 ARID3BQ8IVW6 561 aaPredicted RBP11.15□□□□□ -0.62
CXCL12-203ENST00000374429 DTX3LQ8TDB6 740 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 TKTL2Q9H0I9 626 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 ADAMTS10Q9H324 1103 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 FAM105AQ9NUU6 356 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 PCDHGC3Q9UN70 934 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 AMHP03971 560 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 PRKAR2AP13861 404 aaKnown RBP11.15□□□□□ -0.62
CXCL12-203ENST00000374429 GPR15P49685 360 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 GATMP50440 423 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 ALDH18A1P54886 795 aaKnown RBP11.15□□□□□ -0.62
CXCL12-203ENST00000374429 RPL10AP62906 217 aaKnown RBP11.15□□□□□ -0.62
CXCL12-203ENST00000374429 CAV1Q03135 178 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 GRB14Q14449 540 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 POU6F1Q14863 301 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 CCDC6Q16204 474 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 PQLC3Q8N755 202 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 ST13P5Q8NFI4 369 aaPredicted RBP11.15□□□□□ -0.62
CXCL12-203ENST00000374429 SPATA22Q8NHS9 363 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 SLC35B2Q8TB61 432 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 ZNF669Q96BR6 464 aaPredicted RBP11.15□□□□□ -0.62
CXCL12-203ENST00000374429 FAM193BQ96PV7 902 aaPredicted RBP11.15□□□□□ -0.62
CXCL12-203ENST00000374429 CSPG4P5Q96PW8 444 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 LRRC37BQ96QE4 947 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 CYTH2Q99418 400 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 SEPT5Q99719 369 aaPredicted RBP11.15□□□□□ -0.62
CXCL12-203ENST00000374429 WDCPQ9H6R7 721 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 CYP3A43Q9HB55 503 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 TMEM30AQ9NV96 361 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 C2CD2Q9Y426 696 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 ARL5CA6NH57 179 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 SNX3O60493 162 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 ARL1P40616 181 aaPredicted RBP11.15□□□□□ -0.62
CXCL12-203ENST00000374429 TIGD5Q53EQ6 642 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 ATAD1Q8NBU5 361 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 RFWD2Q8NHY2 731 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 KBTBD7Q8WVZ9 684 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 PTPRN2Q92932 1015 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 ZNF560Q96MR9 790 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 CYP2S1Q96SQ9 504 aa11.15□□□□□ -0.62
CXCL12-203ENST00000374429 PPARGC1AQ9UBK2 798 aaKnown RBP11.15□□□□□ -0.62
CXCL12-203ENST00000374429 FAM237BA0A1B0GVD1 139 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 NEMP1O14524 444 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 LYPLA1O75608 230 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 ATICP31939 592 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 RGS2P41220 211 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 LAMB3Q13751 1172 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 NOMO1Q15155 1222 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 ZRSR2Q15696 482 aaKnown RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 DLG2Q15700 870 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 DCAF4L1Q3SXM0 396 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 HSP90AA5PQ58FG0 334 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 NOMO2Q5JPE7 1267 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 FAM219BQ5XKK7 198 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 OTOP3Q7RTS5 596 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 TTC7BQ86TV6 843 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 TRABD2AQ86V40 505 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 CIR1Q86X95 450 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 ABI1Q8IZP0 508 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 C12orf50Q8NA57 414 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms