RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 AKR1B15C9JRZ8 316 aaPredicted RBP16.6■□□□□ 0.25
HDHD3-202ENST00000374180 MFAP3LO75121 409 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 MOCS2O96007 188 aaPredicted RBP16.6■□□□□ 0.25
HDHD3-202ENST00000374180 F9P00740 461 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 CYBBP04839 570 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 CHRNB1P11230 501 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 DRD1P21728 446 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 EIF2DP41214 584 aaKnown RBP16.6■□□□□ 0.25
HDHD3-202ENST00000374180 SLC6A11P48066 632 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 TBX2Q13207 712 aaPredicted RBP16.6■□□□□ 0.25
HDHD3-202ENST00000374180 LRRC32Q14392 662 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 GSE1Q14687 1217 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 DGKKQ5KSL6 1271 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 DNAJC24Q6P3W2 148 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 SND1Q7KZF4 910 aaKnown RBP eCLIP16.6■□□□□ 0.25
HDHD3-202ENST00000374180 CNGA4Q8IV77 575 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 FAM217AQ8IXS0 508 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 RXFP2Q8WXD0 754 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 CFAP57Q96MR6 1250 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 XPO6Q96QU8 1125 aaKnown RBP16.6■□□□□ 0.25
HDHD3-202ENST00000374180 TBCBQ99426 244 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 DDX50Q9BQ39 737 aaKnown RBP16.6■□□□□ 0.25
HDHD3-202ENST00000374180 ABHD10Q9NUJ1 306 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 TMEM51Q9NW97 253 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 PLK2Q9NYY3 685 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 ARHGAP20Q9P2F6 1191 aa16.6■□□□□ 0.25
HDHD3-202ENST00000374180 ANKRD62A6NC57 917 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.59■□□□□ 0.25
HDHD3-202ENST00000374180 TSPAN3O60637 253 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 GJB6O95452 261 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 PDGFRAP16234 1089 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 TFE3P19532 575 aaPredicted RBP16.59■□□□□ 0.25
HDHD3-202ENST00000374180 ABCB4P21439 1286 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 RRM1P23921 792 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 RFC1P35251 1148 aaPredicted RBP16.59■□□□□ 0.25
HDHD3-202ENST00000374180 MAGEA9P43362 315 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 RPS9P46781 194 aaKnown RBP16.59■□□□□ 0.25
HDHD3-202ENST00000374180 DEUP1Q05D60 604 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 CCINQ13939 588 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 ARID5BQ14865 1188 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 PREPLQ4J6C6 727 aaPredicted RBP16.59■□□□□ 0.25
HDHD3-202ENST00000374180 MPPE1Q53F39 396 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 FSTL4Q6MZW2 842 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 TRNP1Q6NT89 227 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 WDR59Q6PJI9 974 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 C12orf40Q86WS4 652 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 DNAAF5Q86Y56 855 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 ATP6V0D2Q8N8Y2 350 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 JOSD2Q8TAC2 188 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 DDI1Q8WTU0 396 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 TMA16Q96EY4 203 aaKnown RBP16.59■□□□□ 0.25
HDHD3-202ENST00000374180 BTN2A3PQ96KV6 586 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 PNKPQ96T60 521 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 ISCUQ9H1K1 167 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 RBM12Q9NTZ6 932 aaKnown RBP16.59■□□□□ 0.25
HDHD3-202ENST00000374180 DLGAP2Q9P1A6 1054 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 DEC1Q9P2X7 70 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 PAXBP1Q9Y5B6 917 aa16.59■□□□□ 0.25
HDHD3-202ENST00000374180 GOLGA6L7A0A1B0GV03 622 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 KCNU1A8MYU2 1149 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 CACNG3O60359 315 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 TULP3O75386 442 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 EGFP01133 1207 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 SDC4P31431 198 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 EIF4A3P38919 411 aaKnown RBP16.58■□□□□ 0.24
HDHD3-202ENST00000374180 PPP2R5DQ14738 602 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 FAM133BQ5BKY9 247 aaKnown RBP16.58■□□□□ 0.24
HDHD3-202ENST00000374180 FYB2Q5VWT5 728 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 NADSYN1Q6IA69 706 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 DCUN1D2Q6PH85 259 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 ETFBKMTQ8IXQ9 262 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 DTWD2Q8NBA8 298 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 PGAP3Q96FM1 320 aaPredicted RBP16.58■□□□□ 0.24
HDHD3-202ENST00000374180 ADAM33Q9BZ11 813 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 WDCPQ9H6R7 721 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 ARHGEF4Q9NR80 690 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 PIGVQ9NUD9 493 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 PARVAQ9NVD7 372 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 DNAJC17Q9NVM6 304 aaKnown RBP16.58■□□□□ 0.24
HDHD3-202ENST00000374180 CALCOCO1Q9P1Z2 691 aa16.58■□□□□ 0.24
HDHD3-202ENST00000374180 ZNF318Q5VUA4 2279 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 A0A087X0T9 212 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 TCRBV5S1A1TA0A578 114 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 C2CD4BA6NLJ0 364 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 PENKP01210 267 aaPredicted RBP16.57■□□□□ 0.24
HDHD3-202ENST00000374180 APODP05090 189 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 FAM228BP0C875 321 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 CXCR3P49682 368 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 NUBP1P53384 320 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 ATP11AP98196 1134 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 MTA1Q13330 715 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 CCDC14Q49A88 953 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 FBXO43Q4G163 708 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 OTUD1Q5VV17 481 aaPredicted RBP16.57■□□□□ 0.24
HDHD3-202ENST00000374180 RFWD3Q6PCD5 774 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 SYNPOQ8N3V7 929 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 TRIM11Q96F44 468 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 MCEEQ96PE7 176 aa16.57■□□□□ 0.24
HDHD3-202ENST00000374180 IRX2Q9BZI1 471 aaPredicted RBP16.57■□□□□ 0.24
HDHD3-202ENST00000374180 DEF6Q9H4E7 631 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms