RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 PRDM5Q9NQX1 630 aaPredicted RBP11.55□□□□□ -0.56
RPRD1B-201ENST00000373433 SNTG2Q9NY99 539 aa11.55□□□□□ -0.56
RPRD1B-201ENST00000373433 RABGEF1Q9UJ41 708 aa11.55□□□□□ -0.56
RPRD1B-201ENST00000373433 HES2Q9Y543 173 aa11.55□□□□□ -0.56
RPRD1B-201ENST00000373433 DOCK1Q14185 1865 aa11.55□□□□□ -0.56
RPRD1B-201ENST00000373433 FOCADQ5VW36 1801 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 ALOX15BO15296 676 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 HUS1O60921 280 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 FKBP6O75344 327 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 KRT1P04264 644 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 CCDC166P0CW27 439 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 AKAP5P24588 427 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 AQP5P55064 265 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 CYLC2Q14093 348 aaPredicted RBP11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 TMEM259Q4ZIN3 620 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 EFHC1Q5JVL4 640 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 EFCAB3Q8N7B9 438 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 ICA1LQ8NDH6 482 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 SHC3Q92529 594 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 S100A14Q9HCY8 104 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 PTTG2Q9NZH5 202 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 ZBBXA8MT70 800 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 C22orf31O95567 290 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 ARF4P18085 180 aaPredicted RBP11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 CACNB2Q08289 660 aaPredicted RBP11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 PTK7Q13308 1070 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 MORF4L2Q15014 288 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 PRKD1Q15139 912 aaPredicted RBP11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 CLEC16AQ2KHT3 1053 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 BRSK2Q8IWQ3 736 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 MCOLN2Q8IZK6 566 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 ZNF276Q8N554 614 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 FBXO36Q8NEA4 188 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 CDT1Q9H211 546 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 ZNF232Q9UNY5 417 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 CLUHO75153 1309 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 GPR182O15218 404 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 MED7O43513 233 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 BUD23O43709 281 aaKnown RBP11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 LIASO43766 372 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 INHBAP08476 426 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 MCF2P10911 925 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 ADSSP30520 456 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 GTF2H1P32780 548 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 TM4SF4P48230 202 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 VEGFBP49765 207 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 SNX16P57768 344 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 MYL6P60660 151 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 SFSWAPQ12872 951 aaKnown RBP11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 PSMD6Q15008 389 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 KLHL38Q2WGJ6 581 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 SLC27A1Q6PCB7 646 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 C1orf228Q6PIY5 440 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 PLEKHO2Q8TD55 490 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 FAM172AQ8WUF8 416 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 TRIB2Q92519 343 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 ALKBH8Q96BT7 664 aaKnown RBP11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 HPDLQ96IR7 371 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 FIZ1Q96SL8 496 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 WWP1Q9H0M0 922 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 APPL1Q9UKG1 709 aa11.54□□□□□ -0.56
RPRD1B-201ENST00000373433 MYO7AQ13402 2215 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 A0A0B4J269 797 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 PROSCO94903 275 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 HOXC6P09630 235 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 PDE1BQ01064 536 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 NFIL3Q16649 462 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 SLC13A1Q9BZW2 595 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 RNF186Q9NXI6 227 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 TNFSF13BQ9Y275 285 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 TDRKHQ9Y2W6 561 aaKnown RBP11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 GMEB1Q9Y692 573 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 COPEO14579 308 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 PQBP1O60828 265 aaKnown RBP11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 SORBS2O94875 1100 aaKnown RBP11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 IRX4P78413 519 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 C1QTNF12Q5T7M4 302 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 OR6B2Q6IFH4 312 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 KLHDC10Q6PID8 442 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 TRIM67Q6ZTA4 783 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 WDR49Q8IV35 697 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 TMEM35BQ8NCS4 154 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 NIF3L1Q9GZT8 377 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 PRKAG2Q9UGJ0 569 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 ADAMTS6Q9UKP5 1117 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 CDY2AQ9Y6F7 541 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 COL1A2P08123 1366 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 CAPN8A6NHC0 703 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 INHAP05111 366 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 FOLH1Q04609 750 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 ITKQ08881 620 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 CBX3Q13185 183 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 MSLNQ13421 630 aaPredicted RBP11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 PAN2Q504Q3 1202 aaKnown RBP11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 PPP6R3Q5H9R7 873 aaPredicted RBP11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 C12orf56Q8IXR9 622 aa11.53□□□□□ -0.56
RPRD1B-201ENST00000373433 SERAC1Q96JX3 654 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms