RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 ERI2A8K979 691 aaKnown RBP11.71□□□□□ -0.53
PTPRF-203ENST00000372407 ACKR2O00590 384 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 LZTS3O60299 673 aaPredicted RBP11.71□□□□□ -0.53
PTPRF-203ENST00000372407 BAIAP3O94812 1187 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 ATP5BP06576 529 aaKnown RBP11.71□□□□□ -0.53
PTPRF-203ENST00000372407 SERPINF2P08697 491 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 INSRRP14616 1297 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 ATP6V1B2P21281 511 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 ADRA1DP25100 572 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 CDK7P50613 346 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 GTF2A2P52657 109 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 CCDC15Q0P6D6 951 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 TMEM132BQ14DG7 1078 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 CCDC142Q17RM4 750 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 GRTP1Q5TC63 336 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 CENPLQ8N0S6 344 aaPredicted RBP11.71□□□□□ -0.53
PTPRF-203ENST00000372407 SLC7A5P2Q9GIP4 190 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 TSC22D4Q9Y3Q8 395 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 LRP6O75581 1613 aa11.71□□□□□ -0.53
PTPRF-203ENST00000372407 SAC3D1A6NKF1 404 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 SRRM3A6NNA2 597 aaPredicted RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 RASSF9O75901 435 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 FAM58BPP0C7Q3 252 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 MIPP30301 263 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 CCR1P32246 355 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 ANXA11P50995 505 aaKnown RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 RENBPP51606 427 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 FAAP100Q0VG06 881 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 CNTN1Q12860 1018 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 ILF2Q12905 390 aaKnown RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 CRY2Q49AN0 593 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 PAN2Q504Q3 1202 aaKnown RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 TBCELQ5QJ74 424 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 DACT2Q5SW24 774 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 KATNAL2Q8IYT4 538 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 BTN2A2Q8WVV5 523 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 NMD3Q96D46 503 aaKnown RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 MMADHCQ9H3L0 296 aaPredicted RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 ACTR8Q9H981 624 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 UTP6Q9NYH9 597 aaKnown RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 CROTQ9UKG9 612 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 TRHDEQ9UKU6 1024 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 SATB2Q9UPW6 733 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 A0A1B0GW55 424 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 SLC12A8A0AV02 714 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 SNTNA6NMZ2 147 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 KCNK1O00180 336 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 TRDMT1O14717 391 aaKnown RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 CSDE1O75534 798 aaKnown RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 KRT75O95678 551 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 RPLP2P05387 115 aaKnown RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 DUX4L2P0CJ85 424 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 DUX4L3P0CJ86 424 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 DUX4L4P0CJ87 422 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 DUX4L5P0CJ88 424 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 DUX4L6P0CJ89 424 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 DUX4L7P0CJ90 424 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 MLNP12872 115 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 BMP6P22004 513 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 ME2P23368 584 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 DNAJB2P25686 324 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 NPY2RP49146 381 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 SLC12A3P55017 1021 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 NCKAP1LP55160 1127 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 EFEMP1Q12805 493 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 TERB1Q8NA31 727 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 STK32AQ8WU08 396 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 CENPTQ96BT3 561 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 FAM120BQ96EK7 910 aaKnown RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 CPB2Q96IY4 423 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 MAML3Q96JK9 1138 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 NSMCE2Q96MF7 247 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 PPP1R10Q96QC0 940 aaKnown RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 RHBDL2Q9NX52 303 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 USE1Q9NZ43 259 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 DUX4Q9UBX2 424 aa11.71□□□□□ -0.54
PTPRF-203ENST00000372407 CAB39Q9Y376 341 aaPredicted RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.71□□□□□ -0.54
PTPRF-203ENST00000372407 PARP4Q9UKK3 1724 aaKnown RBP11.7□□□□□ -0.54
PTPRF-203ENST00000372407 SNX3O60493 162 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 CBX6O95503 412 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 EPB42P16452 691 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 SKIV2L2P42285 1042 aaKnown RBP11.7□□□□□ -0.54
PTPRF-203ENST00000372407 PSMD7P51665 324 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 KRR1Q13601 381 aaKnown RBP11.7□□□□□ -0.54
PTPRF-203ENST00000372407 KCNT2Q6UVM3 1135 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 PTAR1Q7Z6K3 402 aaPredicted RBP11.7□□□□□ -0.54
PTPRF-203ENST00000372407 RNF180Q86T96 592 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 MSL3Q8N5Y2 521 aaKnown RBP11.7□□□□□ -0.54
PTPRF-203ENST00000372407 POU5F2Q8N7G0 328 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 PHF21BQ96EK2 531 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 SYT15Q9BQS2 421 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 GUCA1CO95843 209 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 HMGCRP04035 888 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 CKMP06732 381 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 ALADP13716 330 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 DRG2P55039 364 aaKnown RBP11.7□□□□□ -0.54
PTPRF-203ENST00000372407 NCALDP61601 193 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 SLC45A4Q5BKX6 768 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 KYAT3Q6YP21 454 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms