RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ZC3H12AQ5D1E8 599 aaKnown RBP15.12■□□□□ 0.01
NDC1-201ENST00000371429 ZC3H12BQ5HYM0 836 aaKnown RBP15.12■□□□□ 0.01
NDC1-201ENST00000371429 FBXL19Q6PCT2 694 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 SH3RF1Q7Z6J0 888 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 JADE3Q92613 823 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 TMEM159Q96B96 161 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 CMTM5Q96DZ9 223 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 EIF3LQ9Y262 564 aaKnown RBP15.12■□□□□ 0.01
NDC1-201ENST00000371429 MTO1Q9Y2Z2 717 aaKnown RBP15.12■□□□□ 0.01
NDC1-201ENST00000371429 BCL9LQ86UU0 1499 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 SKAP2O75563 359 aaPredicted RBP15.12■□□□□ 0.01
NDC1-201ENST00000371429 CHKAP35790 457 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 PSEN1P49768 467 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 MGAT5Q09328 741 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 KCNA10Q16322 511 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 CACHD1Q5VU97 1274 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 LLGL2Q6P1M3 1020 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 ABHD15Q6UXT9 468 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 MTMR8Q96EF0 704 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 OR12D3Q9UGF7 316 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 SLC27A5Q9Y2P5 690 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 CXCL14O95715 111 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 RBP1P09455 135 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 SELPP16109 830 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 NLRP9Q7RTR0 991 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 LOC100653049A0A140TA62 436 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 KRT34O76011 436 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 SPATA31C1P0DKV0 1188 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 NDUFV1P49821 464 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 ZNF280AP59817 542 aaPredicted RBP15.11■□□□□ 0.01
NDC1-201ENST00000371429 RARS2Q5T160 578 aaKnown RBP15.11■□□□□ 0.01
NDC1-201ENST00000371429 SLC26A11Q86WA9 606 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 EPN3Q9H201 632 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 CYP4F12Q9HCS2 524 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 DTNAQ9Y4J8 743 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 ERVK-10P10266 1014 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 CYP2A6P11509 494 aaPredicted RBP15.11■□□□□ 0.01
NDC1-201ENST00000371429 ERFP50548 548 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 HNRNPH2P55795 449 aaKnown RBP15.11■□□□□ 0.01
NDC1-201ENST00000371429 ARMC12Q5T9G4 340 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 PAPD7Q5XG87 772 aaKnown RBP15.11■□□□□ 0.01
NDC1-201ENST00000371429 KCNT2Q6UVM3 1135 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 KCNK16Q96T55 309 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 PRKD2Q9BZL6 878 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 COL1A2P08123 1366 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 RNF103O00237 685 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 ZNF7P17097 686 aaPredicted RBP15.11■□□□□ 0.01
NDC1-201ENST00000371429 TUSC3Q13454 348 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 CSHL1Q14406 222 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 DNAL1Q4LDG9 190 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 NYAP1Q6ZVC0 841 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 OTOAQ7RTW8 1153 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 MSL3Q8N5Y2 521 aaKnown RBP15.11■□□□□ 0.01
NDC1-201ENST00000371429 MYLPFQ96A32 169 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 CCT8L2Q96SF2 557 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 CCDC3Q9BQI4 270 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 NXF3Q9H4D5 531 aaKnown RBP15.11■□□□□ 0.01
NDC1-201ENST00000371429 IL1RL2Q9HB29 575 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 FAM153AQ9UHL3 310 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 ARHGAP26Q9UNA1 814 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 CFAP73A6NFT4 308 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 TOMM70O94826 608 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 DARSP14868 501 aaKnown RBP15.11■□□□□ 0.01
NDC1-201ENST00000371429 SERPINA4P29622 427 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 GPC1P35052 558 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 LAYNQ6UX15 382 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 SETD3Q86TU7 594 aaPredicted RBP15.11■□□□□ 0.01
NDC1-201ENST00000371429 ZNF333Q96JL9 665 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 C17orf80Q9BSJ5 609 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 BTBD7Q9P203 1132 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 ASTN1O14525 1302 aa15.11■□□□□ 0.01
NDC1-201ENST00000371429 LYPLA2O95372 231 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 SNHG28P0DPA3 235 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 CYP2C18P33260 490 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 MMP13P45452 471 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.1■□□□□ 0.01
NDC1-201ENST00000371429 LRP10Q7Z4F1 713 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 RBM23Q86U06 439 aaKnown RBP15.1■□□□□ 0.01
NDC1-201ENST00000371429 OR5B17Q8NGF7 314 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 EPS8L1Q8TE68 723 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 ABHD8Q96I13 439 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 PAFAH2Q99487 392 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 C1QTNF7Q9BXJ2 289 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 PEX10O60683 326 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 SKOR1P84550 965 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 RAP1GAP2Q684P5 730 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 SLC9A9Q8IVB4 645 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 ANKRD52Q8NB46 1076 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 ERP27Q96DN0 273 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 ERLEC1Q96DZ1 483 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 VAT1Q99536 393 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 RBBP8Q99708 897 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 NFKBIEO00221 500 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 ITGB6P18564 788 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 OR1D2P34982 312 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 HALP42357 657 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 CDC16Q13042 620 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 C16orf89Q6UX73 402 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 RGL4Q8IZJ4 473 aa15.1■□□□□ 0.01
NDC1-201ENST00000371429 LRRC52Q8N7C0 313 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms