RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 VWDEQ8N2E2 1590 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 CCT8L1PA6NM43 557 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 NT5C1B-RDH14C9J2C7 533 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 SPATA31D3P0C874 917 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 OAZ1P54368 228 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 RPS7P62081 194 aaKnown RBP13.22□□□□□ -0.29
PTPRK-207ENST00000368226 ELAVL2Q12926 359 aaKnown RBP13.22□□□□□ -0.29
PTPRK-207ENST00000368226 PPIL2Q13356 520 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 CCDC142Q17RM4 750 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 SPATA31D4Q6ZUB0 917 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 MARK2Q7KZI7 788 aaKnown RBP13.22□□□□□ -0.29
PTPRK-207ENST00000368226 DUSP9Q99956 384 aaKnown RBP13.22□□□□□ -0.29
PTPRK-207ENST00000368226 CTNNAL1Q9UBT7 734 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 F8VP50 259 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 RASSF9O75901 435 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 WDR47O94967 919 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 KCNA3P22001 575 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 NLRP9Q7RTR0 991 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 BRSK2Q8IWQ3 736 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 SYTL1Q8IYJ3 562 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 RSPH1Q8WYR4 309 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 APBA2Q99767 749 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 ACTR8Q9H981 624 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 TBC1D13Q9NVG8 400 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 TAS2R14Q9NYV8 317 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 SPG21Q9NZD8 308 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 CRYL1Q9Y2S2 319 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 FAM107AO95990 144 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 SERPINF2P08697 491 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 ETS1P14921 441 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 FMO4P31512 558 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 POTEAQ6S8J7 498 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 SPATA20Q8TB22 786 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 HTR3CQ8WXA8 447 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 THG1LQ9NWX6 298 aaKnown RBP13.22□□□□□ -0.29
PTPRK-207ENST00000368226 IFRD1O00458 451 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-207ENST00000368226 VAPBO95292 243 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 ZSCAN5DPP0CG00 497 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 SLC2A4P14672 509 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 ATP6V1B1P15313 513 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 GLRA2P23416 452 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 SSTR1P30872 391 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 PLK1P53350 603 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 IKBKEQ14164 716 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 EFL1Q7Z2Z2 1120 aaKnown RBP13.22□□□□□ -0.29
PTPRK-207ENST00000368226 ZNF410Q86VK4 478 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 KCNMB4Q86W47 210 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 TMEM120AQ9BXJ8 343 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 SEMA4AQ9H3S1 761 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 NDOR1Q9UHB4 597 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 SLIT1O75093 1534 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 RNF103O00237 685 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 MIPP30301 263 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 GRK3P35626 688 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 RHBDL3P58872 404 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
PTPRK-207ENST00000368226 IQSEC1Q6DN90 963 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 VGLL2Q8N8G2 317 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 SLC35C1Q96A29 364 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 ELOVL6Q9H5J4 265 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.22□□□□□ -0.29
PTPRK-207ENST00000368226 TRPC4Q9UBN4 977 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 DNPEPQ9ULA0 475 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 ACOT9Q9Y305 439 aa13.22□□□□□ -0.29
PTPRK-207ENST00000368226 ADRB2P07550 413 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 ZNF23P17027 643 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 CRADDP78560 199 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 RAP1GAP2Q684P5 730 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 SEL1L3Q68CR1 1132 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 CORO1BQ9BR76 489 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 DMGDHQ9UI17 866 aaKnown RBP13.21□□□□□ -0.29
PTPRK-207ENST00000368226 A0A0A6YYK5 440 aaPredicted RBP13.21□□□□□ -0.29
PTPRK-207ENST00000368226 MEI4A8MW99 385 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 B4GALT5O43286 388 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 MAN1A2O60476 641 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 SLC6A3Q01959 620 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 CCNG2Q16589 344 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 ZNF470Q6ECI4 717 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 RIOX2Q8IUF8 465 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 P3H2Q8IVL5 708 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 ACTRT1Q8TDG2 376 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 SPACA6W5XKT8 324 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 SALL3Q9BXA9 1300 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 PIK3CDO00329 1044 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 APOA4P06727 396 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 CPA3P15088 417 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 CD52P31358 61 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 PPP3CAQ08209 521 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 ATP6AP1LQ52LC2 224 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 TMEM154Q6P9G4 183 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 CSGALNACT1Q8TDX6 532 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 TBL1YQ9BQ87 522 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 FRMD8P1Q9BZ68 369 aaPredicted RBP13.21□□□□□ -0.29
PTPRK-207ENST00000368226 MAP10Q9P2G4 905 aa13.21□□□□□ -0.29
PTPRK-207ENST00000368226 DRG1Q9Y295 367 aaKnown RBP13.21□□□□□ -0.29
PTPRK-207ENST00000368226 TNNI3P19429 210 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 NR6A1Q15406 480 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 N4BP2L1Q5TBK1 243 aaPredicted RBP13.21□□□□□ -0.3
PTPRK-207ENST00000368226 MTDHQ86UE4 582 aaKnown RBP13.21□□□□□ -0.3
PTPRK-207ENST00000368226 MAP4K3Q8IVH8 894 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms