RNA–Protein interactions for RNA: ENST00000368209.9

HDGF-203, Transcript of heparin binding growth factor, humanhuman

TSL 2 BASIC

Gene HDGF, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-203ENST00000368209 SMARCB1Q12824 385 aa13.8□□□□□ -0.2
HDGF-203ENST00000368209 XRCC4Q13426 336 aa13.8□□□□□ -0.2
HDGF-203ENST00000368209 MORF4L2Q15014 288 aa13.8□□□□□ -0.2
HDGF-203ENST00000368209 USP41Q3LFD5 358 aa13.8□□□□□ -0.2
HDGF-203ENST00000368209 ANKRD22Q5VYY1 191 aa13.8□□□□□ -0.2
HDGF-203ENST00000368209 MON1AQ86VX9 555 aa13.8□□□□□ -0.2
HDGF-203ENST00000368209 SLC39A11Q8N1S5 342 aa13.8□□□□□ -0.2
HDGF-203ENST00000368209 NAT8LQ8N9F0 302 aa13.8□□□□□ -0.2
HDGF-203ENST00000368209 SPATA17Q96L03 361 aa13.8□□□□□ -0.2
HDGF-203ENST00000368209 CDC42EP4Q9H3Q1 356 aaKnown RBP13.8□□□□□ -0.2
HDGF-203ENST00000368209 WDCPQ9H6R7 721 aa13.8□□□□□ -0.2
HDGF-203ENST00000368209 PRDM16Q9HAZ2 1276 aa13.8□□□□□ -0.2
HDGF-203ENST00000368209 DNAJC17Q9NVM6 304 aaKnown RBP13.8□□□□□ -0.2
HDGF-203ENST00000368209 BACE2Q9Y5Z0 518 aa13.8□□□□□ -0.2
HDGF-203ENST00000368209 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.79□□□□□ -0.2
HDGF-203ENST00000368209 TCRBV7S3A2A0A539 114 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 H3BRJ5 948 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 H7C0C1 242 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 CREB3O43889 395 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 RAG1P15918 1043 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 ATF6P18850 670 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 ATP5OP48047 213 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 HCAR3P49019 387 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 GAD2Q05329 585 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 DUSP4Q13115 394 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 SLC29A2Q14542 456 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 PAFAH1B3Q15102 231 aaKnown RBP13.79□□□□□ -0.2
HDGF-203ENST00000368209 HSP90B2PQ58FF3 399 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 BTBD8Q5XKL5 378 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 FAM117BQ6P1L5 589 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 MSANTD2Q6P1R3 559 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 TP53INP2Q8IXH6 220 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 CCDC33Q8N5R6 958 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 C2orf15Q8WU43 125 aaKnown RBP13.79□□□□□ -0.2
HDGF-203ENST00000368209 QKIQ96PU8 341 aaKnown RBP eCLIP13.79□□□□□ -0.21e-6■■■■□ 23.1
HDGF-203ENST00000368209 CLSTN3Q9BQT9 956 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 FBXO44Q9H4M3 255 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 GMIPQ9P107 970 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 SFMBT1Q9UHJ3 866 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 NUDT5Q9UKK9 219 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 SHOC2Q9UQ13 582 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 MRPL42Q9Y6G3 142 aaKnown RBP13.79□□□□□ -0.2
HDGF-203ENST00000368209 EEF2KO00418 725 aaKnown RBP13.79□□□□□ -0.2
HDGF-203ENST00000368209 MSI1O43347 362 aaKnown RBP13.79□□□□□ -0.2
HDGF-203ENST00000368209 LINC00271P0C7V0 271 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 HSPA1AP0DMV8 641 aaKnown RBP13.79□□□□□ -0.2
HDGF-203ENST00000368209 HSPA1BP0DMV9 641 aaKnown RBP13.79□□□□□ -0.2
HDGF-203ENST00000368209 PSMD5Q16401 504 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 SLC45A4Q5BKX6 768 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 CCDC25Q86WR0 208 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 CMTR2Q8IYT2 770 aaKnown RBP13.79□□□□□ -0.2
HDGF-203ENST00000368209 NETO2Q8NC67 525 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 TMBIM4Q9HC24 238 aa13.79□□□□□ -0.2
HDGF-203ENST00000368209 CFAP69A5D8W1 941 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 KCNN4O15554 427 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 OPA1O60313 960 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 TMEM63AO94886 807 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 SOD2P04179 222 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 VAV1P15498 845 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 MGAT5BQ3V5L5 792 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 CEP85LQ5SZL2 805 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 DENND5BQ6ZUT9 1274 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 TRMT10CQ7L0Y3 403 aaKnown RBP13.78□□□□□ -0.2
HDGF-203ENST00000368209 SLC39A13Q96H72 371 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 FOXP3Q9BZS1 431 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 OSBPL2Q9H1P3 480 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 VPS18Q9P253 973 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 KCNU1A8MYU2 1149 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 GOLGA8KD6RF30 607 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 EFCAB14O75071 495 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 LRIG2O94898 1065 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 ERCC2P18074 760 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 OR1D2P34982 312 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 DSG1Q02413 1049 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 ARL13BQ3SXY8 428 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 BRMS1LQ5PSV4 323 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 RASIP1Q5U651 963 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 MANEALQ5VSG8 457 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 PPIL6Q8IXY8 311 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 TMEM199Q8N511 208 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 NPWQ8N729 165 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 COLGALT1Q8NBJ5 622 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 ZNF558Q96NG5 402 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 RUFY1Q96T51 708 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 SEPT5Q99719 369 aaPredicted RBP13.78□□□□□ -0.2
HDGF-203ENST00000368209 WDR83Q9BRX9 315 aaKnown RBP13.78□□□□□ -0.2
HDGF-203ENST00000368209 NINJ2Q9NZG7 142 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 OR12D3Q9UGF7 316 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 NR2E3Q9Y5X4 410 aa13.78□□□□□ -0.2
HDGF-203ENST00000368209 BAIAP3O94812 1187 aa13.77□□□□□ -0.21
HDGF-203ENST00000368209 ABLIM3O94929 683 aa13.77□□□□□ -0.21
HDGF-203ENST00000368209 TTC4O95801 387 aa13.77□□□□□ -0.21
HDGF-203ENST00000368209 ZDHHC11BP0C7U3 371 aa13.77□□□□□ -0.21
HDGF-203ENST00000368209 YWHAQP27348 245 aa13.77□□□□□ -0.21
HDGF-203ENST00000368209 KCNJ11Q14654 390 aa13.77□□□□□ -0.21
HDGF-203ENST00000368209 PPP2R5DQ14738 602 aa13.77□□□□□ -0.21
HDGF-203ENST00000368209 FASTKD3Q14CZ7 662 aaKnown RBP13.77□□□□□ -0.21
HDGF-203ENST00000368209 PRKD1Q15139 912 aaPredicted RBP13.77□□□□□ -0.21
HDGF-203ENST00000368209 HOOK3Q86VS8 718 aa13.77□□□□□ -0.21
HDGF-203ENST00000368209 CDKL3Q8IVW4 592 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms