RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 CDH17Q12864 832 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 VGLL4Q14135 290 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 KIAA0319LQ8IZA0 1049 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 DNAJB3Q8WWF6 145 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 ADNPQ9H2P0 1102 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 CAAP1Q9H8G2 361 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 NCKIPSDQ9NZQ3 722 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 SLC30A1Q9Y6M5 507 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 TCRBV9S1A1TA0A576 114 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 SLCO1B7G3V0H7 640 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 GOLGA8TH3BQL2 631 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 THP07101 528 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 PAX7P23759 505 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 RANBP1P43487 201 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 ABCG1P45844 678 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 HSPA13P48723 471 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 LHX1P48742 406 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 DCAF12L1Q5VU92 463 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 ZDHHC24Q6UX98 284 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 ZNF398Q8TD17 642 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 HASPINQ8TF76 798 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 USP6NLQ92738 828 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 ZBTB10Q96DT7 871 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 SLC17A7Q9P2U7 560 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 RGPD5Q99666 1765 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 NUP188Q5SRE5 1749 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 ADM5C9JUS6 153 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 CXCL11O14625 94 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 DCXO43602 365 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 PTK2BQ14289 1009 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 SWT1Q5T5J6 900 aaKnown RBP11.99□□□□□ -0.49
COPA-202ENST00000368069 KYQ8NBH2 561 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 CLEC4DQ8WXI8 215 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 FAM136AQ96C01 138 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 TUBGCP3Q96CW5 907 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 CCDC126Q96EE4 140 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 ZNF512Q96ME7 567 aaPredicted RBP11.99□□□□□ -0.49
COPA-202ENST00000368069 RPRD1AQ96P16 312 aaPredicted RBP11.99□□□□□ -0.49
COPA-202ENST00000368069 NRDE2Q9H7Z3 1164 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.99□□□□□ -0.49
COPA-202ENST00000368069 FAM8A1Q9UBU6 413 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 ROBO1Q9Y6N7 1651 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 COL14A1Q05707 1796 aaKnown RBP11.99□□□□□ -0.49
COPA-202ENST00000368069 A0A0A0MRY4 1105 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 MAGEB16A2A368 324 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 NME5P56597 212 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 FASTKD3Q14CZ7 662 aaKnown RBP11.99□□□□□ -0.49
COPA-202ENST00000368069 TIGD7Q6NT04 549 aaPredicted RBP11.99□□□□□ -0.49
COPA-202ENST00000368069 MIB1Q86YT6 1006 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 SPATA13Q96N96 652 aa11.99□□□□□ -0.49
COPA-202ENST00000368069 OLA1Q9NTK5 396 aaKnown RBP11.99□□□□□ -0.49
COPA-202ENST00000368069 CASTOR2A6NHX0 329 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 RECQL4O94761 1208 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 MT-CO1P00395 513 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 PSMB4P28070 264 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 ACCSLQ4AC99 568 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 RNF219Q5W0B1 726 aaPredicted RBP11.98□□□□□ -0.49
COPA-202ENST00000368069 CLEC4FQ8N1N0 589 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 KAT2BQ92831 832 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 THAP11Q96EK4 314 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 SIKE1Q9BRV8 207 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 TRIM54Q9BYV2 358 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 GPAMQ9HCL2 828 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 ZDHHC18Q9NUE0 388 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 RBM22Q9NW64 420 aaKnown RBP eCLIP11.98□□□□□ -0.498e-11■■■■■ 49.7
COPA-202ENST00000368069 SLC8A2Q9UPR5 921 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 LRP6O75581 1613 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 CST3P01034 146 aaPredicted RBP11.98□□□□□ -0.49
COPA-202ENST00000368069 ERBB2P04626 1255 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 ADSSP30520 456 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 ADCYAP1R1P41586 468 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 GTF2A2P52657 109 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 HIRAP54198 1017 aaPredicted RBP11.98□□□□□ -0.49
COPA-202ENST00000368069 PRKAA1Q13131 559 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 MRNIPQ6NTE8 343 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 ZNF410Q86VK4 478 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 BEGAINQ9BUH8 593 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 KIF17Q9P2E2 1029 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 TMEM59LQ9UK28 342 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 SNX13Q9Y5W8 968 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 ZC3H4Q9UPT8 1303 aaKnown RBP11.98□□□□□ -0.49
COPA-202ENST00000368069 C2CD2LO14523 706 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 ZNF862O60290 1169 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 DDNO94850 711 aaPredicted RBP11.98□□□□□ -0.49
COPA-202ENST00000368069 PROCP04070 461 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 SLC2A3P11169 496 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 ADORA2AP29274 412 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 THPOP40225 353 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 PEX5P50542 639 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 TWF1Q12792 350 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 SPDYAQ5MJ70 313 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 ATP6V0D2Q8N8Y2 350 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 ASPSCR1Q9BZE9 553 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 MUC3BQ9H195 1237 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 VTA1Q9NP79 307 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 FBXO6Q9NRD1 293 aaPredicted RBP11.98□□□□□ -0.49
COPA-202ENST00000368069 CREB1P16220 341 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 CHRM3P20309 590 aa11.98□□□□□ -0.49
COPA-202ENST00000368069 SKIV2L2P42285 1042 aaKnown RBP11.98□□□□□ -0.49
COPA-202ENST00000368069 PTDSS1P48651 473 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms