RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 NFICP08651 508 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 ZNF286BP0CG31 522 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 ATICP31939 592 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 SLC26A2P50443 739 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 PTPN11Q06124 597 aaPredicted RBP15.2■□□□□ 0.02
PRKN-204ENST00000366896 RIPOR1Q6ZS17 1223 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 SCUBE1Q8IWY4 988 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 TRIM42Q8IWZ5 723 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 FAM111AQ96PZ2 611 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 PANX3Q96QZ0 392 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 CENPKQ9BS16 269 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 ELOVL4Q9GZR5 314 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 PAK5Q9P286 719 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 PLA2G4CQ9UP65 541 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 H3BRJ5 948 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 TM7SF2O76062 418 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 MICAL2O94851 1124 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 ATP5BP06576 529 aaKnown RBP15.2■□□□□ 0.02
PRKN-204ENST00000366896 INHBAP08476 426 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 HSPA8P11142 646 aaKnown RBP15.2■□□□□ 0.02
PRKN-204ENST00000366896 BGNP21810 368 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 CPA2P48052 419 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 ACTR3P61158 418 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 AP2B1P63010 937 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 ATF7IP2Q5U623 682 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 TRNP1Q6NT89 227 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 SLC26A11Q86WA9 606 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 PPP2R3CQ969Q6 453 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 NLRP4Q96MN2 994 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 CNPY3Q9BT09 278 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 NDE1Q9NXR1 346 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 ERAP1Q9NZ08 941 aa15.2■□□□□ 0.02
PRKN-204ENST00000366896 M0QYV0 167 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 CILPO75339 1184 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 CPT1AP50416 773 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 GJA9P57773 515 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 YWHAGP61981 247 aaKnown RBP eCLIP15.19■□□□□ 0.02
PRKN-204ENST00000366896 CDC16Q13042 620 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 DARS2Q6PI48 645 aaKnown RBP15.19■□□□□ 0.02
PRKN-204ENST00000366896 C4orf22Q6V702 233 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 CYP4V2Q6ZWL3 525 aaPredicted RBP15.19■□□□□ 0.02
PRKN-204ENST00000366896 PRPF39Q86UA1 669 aaKnown RBP15.19■□□□□ 0.02
PRKN-204ENST00000366896 ALYREFQ86V81 257 aaKnown RBP15.19■□□□□ 0.02
PRKN-204ENST00000366896 TREML1Q86YW5 311 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 C1orf127Q8N9H9 656 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 RBM15BQ8NDT2 890 aaKnown RBP15.19■□□□□ 0.02
PRKN-204ENST00000366896 FBXO27Q8NI29 283 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 TTC17Q96AE7 1141 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 LRRC39Q96DD0 335 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 PIWIL1Q96J94 861 aaKnown RBP15.19■□□□□ 0.02
PRKN-204ENST00000366896 NFKBIZQ9BYH8 718 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 UPF3AQ9H1J1 476 aaKnown RBP15.19■□□□□ 0.02
PRKN-204ENST00000366896 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.19■□□□□ 0.02
PRKN-204ENST00000366896 TNFSF13BQ9Y275 285 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 COMMD3-BMI1R4GMX3 469 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 FAM237BA0A1B0GVD1 139 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 ZNF487B1APH4 448 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 INO80B-WBP1J3KQ70 363 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 CIB2O75838 187 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 PYGBP11216 843 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 VDRP11473 427 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 GPD2P43304 727 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 BEX3Q00994 111 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 LSAMPQ13449 338 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 HNRNPDQ14103 355 aaKnown RBP15.19■□□□□ 0.02
PRKN-204ENST00000366896 TMEM132AQ24JP5 1023 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 PABPC1LQ4VXU2 614 aaKnown RBP15.19■□□□□ 0.02
PRKN-204ENST00000366896 FAM102AQ5T9C2 384 aaPredicted RBP15.19■□□□□ 0.02
PRKN-204ENST00000366896 C6orf163Q5TEZ5 329 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 TTC39BQ5VTQ0 682 aaPredicted RBP15.19■□□□□ 0.02
PRKN-204ENST00000366896 DPH6Q7L8W6 267 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 TMEM176AQ96HP8 235 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 OLFM3Q96PB7 478 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 INO80BQ9C086 356 aaPredicted RBP15.19■□□□□ 0.02
PRKN-204ENST00000366896 MINDY3Q9H8M7 445 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 GPAMQ9HCL2 828 aa15.19■□□□□ 0.02
PRKN-204ENST00000366896 MYADML2A6NDP7 307 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 PRKCHP24723 683 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 NKX3-2P78367 333 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 PDK2Q15119 407 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 FSCN1Q16658 493 aaKnown RBP15.18■□□□□ 0.02
PRKN-204ENST00000366896 C15orf59Q2T9L4 293 aaPredicted RBP15.18■□□□□ 0.02
PRKN-204ENST00000366896 LGSNQ5TDP6 509 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 C1orf228Q6PIY5 440 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 MARK2Q7KZI7 788 aaKnown RBP15.18■□□□□ 0.02
PRKN-204ENST00000366896 ULK2Q8IYT8 1036 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 TTC39CQ8N584 583 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 UBA3Q8TBC4 463 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 RAB3IL1Q8TBN0 382 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 LRRN4Q8WUT4 740 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 CFAP36Q96G28 342 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 C7orf26Q96N11 449 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 CDT1Q9H211 546 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 RNPEPQ9H4A4 650 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 USP29Q9HBJ7 922 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 KCNK4Q9NYG8 393 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 KIAA1257Q9ULG3 409 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 E5RJQ4 531 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 H3BRB1 525 aa15.18■□□□□ 0.02
PRKN-204ENST00000366896 BUD23O43709 281 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms