RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 MMP8P22894 467 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 KLRK1P26718 216 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 NDUFS1P28331 727 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 SERPINB3P29508 390 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 PTGER1P34995 402 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 HOXD12P35452 270 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 NR4A2P43354 598 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 ID2Q02363 134 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 SLC9C1Q4G0N8 1177 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 CCDC181Q5TID7 509 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 XRRA1Q6P2D8 792 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 OR52L2PQ8NGH6 319 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 C16orf52Q8NHV5 167 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 DEPTORQ8TB45 409 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 WIPF2Q8TF74 440 aaPredicted RBP5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 GATA5Q9BWX5 397 aaPredicted RBP5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 CDCP1Q9H5V8 836 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 C2CD4BA6NLJ0 364 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 AQP12BA6NM10 295 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 TLR2O60603 784 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 KAT7O95251 611 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 IGKV2-30P06310 120 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 SLC3A2P08195 630 aaKnown RBP5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 ITGA5P08648 1049 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 THBS4P35443 961 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 ZNF84P51523 738 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 ANO7Q6IWH7 933 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 RBM44Q6ZP01 1051 aaKnown RBP5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 IRF2BP2Q7Z5L9 587 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 RFX6Q8HWS3 928 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 SYTL1Q8IYJ3 562 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 ZNF548Q8NEK5 533 aaPredicted RBP5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 OVCA2Q8WZ82 227 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 NPIPB3Q92617 1050 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 GPR78Q96P69 363 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 ELAC2Q9BQ52 826 aaKnown RBP5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 NUDT22Q9BRQ3 303 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 HEY2Q9UBP5 337 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 B3GNT3Q9Y2A9 372 aa5.21□□□□□ -1.58
RNU4-28P-201ENST00000364739 TTC34A8MYJ7 566 aa5.2□□□□□ -1.58
RNU4-28P-201ENST00000364739 HNRNPDLO14979 420 aaKnown RBP5.2□□□□□ -1.58
RNU4-28P-201ENST00000364739 NTSR2O95665 410 aa5.2□□□□□ -1.58
RNU4-28P-201ENST00000364739 ANXA6P08133 673 aa5.2□□□□□ -1.58
RNU4-28P-201ENST00000364739 RPS13P62277 151 aaKnown RBP5.2□□□□□ -1.58
RNU4-28P-201ENST00000364739 DHRS13Q6UX07 377 aa5.2□□□□□ -1.58
RNU4-28P-201ENST00000364739 STK33Q9BYT3 514 aa5.2□□□□□ -1.58
RNU4-28P-201ENST00000364739 FOXP1Q9H334 677 aaPredicted RBP5.2□□□□□ -1.58
RNU4-28P-201ENST00000364739 NLRC4Q9NPP4 1024 aa5.2□□□□□ -1.58
RNU4-28P-201ENST00000364739 NECTIN3Q9NQS3 549 aa5.2□□□□□ -1.58
RNU4-28P-201ENST00000364739 TM7SF3Q9NS93 570 aa5.2□□□□□ -1.58
RNU4-28P-201ENST00000364739 FBXO28Q9NVF7 368 aa5.2□□□□□ -1.58
RNU4-28P-201ENST00000364739 DNPH1O43598 174 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 UGDHO60701 494 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 IFIT2P09913 472 aaKnown RBP5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 ITGB6P18564 788 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 MATN1P21941 496 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 SLC8A1P32418 973 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 PPM1AP35813 382 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 SOX2P48431 317 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 HSF1Q00613 529 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 CSHL1Q14406 222 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 ZNF260Q3ZCT1 412 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 ANKRD40Q6AI12 368 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 CCSAPQ6IQ19 270 aaPredicted RBP5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 PIP4P1Q86T03 277 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 TTC30AQ86WT1 665 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 ANKRD13BQ86YJ7 626 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 RHPN2Q8IUC4 686 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 CCDC146Q8IYE0 955 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 ZNF366Q8N895 744 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 Q8N9P0 234 aaPredicted RBP5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 ACRBPQ8NEB7 543 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 SVIPQ8NHG7 77 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 GLMPQ8WWB7 406 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 GJA10Q969M2 543 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 ZNF845Q96IR2 970 aaPredicted RBP5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 PRPF18Q99633 342 aaKnown RBP5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 SENP7Q9BQF6 1050 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 MOV10Q9HCE1 1003 aaKnown RBP5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 HELLSQ9NRZ9 838 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 RXFP3Q9NSD7 469 aa5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.19□□□□□ -1.58
RNU4-28P-201ENST00000364739 ZMYM2Q9UBW7 1377 aa5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 A0A1W2PPC1 479 aa5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 TNFRSF6BO95407 300 aa5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 BMP15O95972 392 aa5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 CD63P08962 238 aa5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 RPS6KB1P23443 525 aa5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 AKT1P31749 480 aa5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 IL6STP40189 918 aaPredicted RBP5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 KRTAP10-9P60411 292 aa5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 STARD3Q14849 445 aa5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 RINT1Q6NUQ1 792 aa5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 LAS2Q8IYD9 372 aa5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 ADGRF4Q8IZF3 695 aa5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 ARL14EPQ8N8R7 260 aaPredicted RBP5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 OR1N1Q8NGS0 311 aa5.18□□□□□ -1.58
RNU4-28P-201ENST00000364739 STYXQ8WUJ0 223 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms