RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ZNF618Q5T7W0 954 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 NAPEPLDQ6IQ20 393 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 FRA10AC1Q70Z53 315 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 UNC45BQ8IWX7 931 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 ADCY4Q8NFM4 1077 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 APOL2Q9BQE5 337 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 DFFAO00273 331 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 NR5A2O00482 541 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 AVILO75366 819 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 GTF2BQ00403 316 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 NR1D2Q14995 579 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 GADL1Q6ZQY3 521 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 CHSY1Q86X52 802 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 TUBGCP3Q96CW5 907 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 TRPC7Q9HCX4 862 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 GIMAP4Q9NUV9 329 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 PNPOQ9NVS9 261 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 CIDEBQ9UHD4 219 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 PRPF19Q9UMS4 504 aaKnown RBP16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 DOLKQ9UPQ8 538 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 DDHD2O94830 711 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 NAA20P61599 178 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 FASTKQ14296 549 aaKnown RBP16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 SAMD4BQ5PRF9 694 aaKnown RBP16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 IL31Q6EBC2 164 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 NPNTQ6UXI9 565 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 AMIGO2Q86SJ2 522 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 PHF13Q86YI8 300 aaPredicted RBP16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 MASTLQ96GX5 879 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 SLC4A5Q9BY07 1137 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 POLR1BQ9H9Y6 1135 aa16.39■□□□□ 0.21
CLSTN1-201ENST00000361311 SIGLEC1Q9BZZ2 1709 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 MAFGO15525 162 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 CDH3P22223 829 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 MXD4Q14582 209 aaPredicted RBP16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 TMEM132DQ14C87 1099 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 NFIL3Q16649 462 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 ANGEL2Q5VTE6 544 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 TAF2Q6P1X5 1199 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 OLFML1Q6UWY5 402 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 ABHD8Q96I13 439 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 OSBPL11Q9BXB4 747 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 NMRAL1Q9HBL8 299 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 XPNPEP3Q9NQH7 507 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 SELENONQ9NZV5 590 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 MYH6P13533 1939 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 ITGB3P05106 788 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 CDH2P19022 906 aaPredicted RBP16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 CYP2F1P24903 491 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 PTPN11Q06124 597 aaPredicted RBP16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 DCAF6Q58WW2 860 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 TMC7Q7Z402 723 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 CAMK1DQ8IU85 385 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 TTLL6Q8N841 843 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 IPMKQ8NFU5 416 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 RNF139Q8WU17 664 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 RCN3Q96D15 328 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 HPDLQ96IR7 371 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 C1orf50Q9BV19 199 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 UTP6Q9NYH9 597 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 A6NHS1 94 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 PSMD3O43242 534 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 EIF4BP23588 611 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 RPL14P50914 215 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 TSPY1Q01534 308 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 IMPG1Q17R60 797 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 TRIM60Q495X7 471 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 RNASEH2BQ5TBB1 312 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 GRTP1Q5TC63 336 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 ATF7IP2Q5U623 682 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 GMCL1P1Q8NEA9 526 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 C9orf16Q9BUW7 83 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 ACAD9Q9H845 621 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 PLEKHA5Q9HAU0 1116 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 DDX4Q9NQI0 724 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 M0QZ92 97 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 CYB561D2O14569 222 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 INPP4BO15327 924 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 MPOP05164 745 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 FDX1P10109 184 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 ACAT1P24752 427 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 RAP1GAPP47736 663 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 TMC5Q6UXY8 1006 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 HEATR4Q86WZ0 1026 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 BANPQ8N9N5 519 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 CPT1BQ92523 772 aa16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 AGO4Q9HCK5 861 aaKnown RBP16.38■□□□□ 0.21
CLSTN1-201ENST00000361311 MRC1P22897 1456 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 VDRP11473 427 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 CHRNB3Q05901 458 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 PTAR1Q7Z6K3 402 aaPredicted RBP16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 SLCO2A1Q92959 643 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 BORCS5Q969J3 196 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 CRAMP1Q96RY5 1269 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 CEP41Q9BYV8 373 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 UNKQ9C0B0 810 aaKnown RBP16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 RUBCNLQ9H714 662 aa16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 CLK4Q9HAZ1 481 aaKnown RBP16.37■□□□□ 0.21
CLSTN1-201ENST00000361311 PARVBQ9HBI1 364 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms