RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 IGSF10Q6WRI0 2623 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 MUC22E2RYF6 1773 aaPredicted RBP22.1■■□□□ 1.13
CD47-202ENST00000361309 ZNF883P0CG24 379 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 YWHAGP61981 247 aaKnown RBP eCLIP22.1■■□□□ 1.13
CD47-202ENST00000361309 PKP1Q13835 747 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 ACAP1Q15027 740 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 HLA-BQ31612 363 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 C19orf48Q6RUI8 117 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 SERPINA13PQ6UXR4 307 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 FAM124AQ86V42 546 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 PIGZQ86VD9 579 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 SLC4A11Q8NBS3 891 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 SLC2A11Q9BYW1 496 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 UBXN6Q9BZV1 441 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 CCDC86Q9H6F5 360 aaKnown RBP22.1■■□□□ 1.13
CD47-202ENST00000361309 TMEM8AQ9HCN3 771 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 USP25Q9UHP3 1055 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 GPSM3Q9Y4H4 160 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 CELSR3Q9NYQ7 3312 aa22.1■■□□□ 1.13
CD47-202ENST00000361309 MYL1P05976 194 aa22.09■■□□□ 1.13
CD47-202ENST00000361309 PRR29P0C7W0 189 aa22.09■■□□□ 1.13
CD47-202ENST00000361309 HLA-EP13747 358 aa22.09■■□□□ 1.13
CD47-202ENST00000361309 ARID5AQ03989 594 aa22.09■■□□□ 1.13
CD47-202ENST00000361309 RAB41Q5JT25 222 aa22.09■■□□□ 1.13
CD47-202ENST00000361309 IL27RAQ6UWB1 636 aa22.09■■□□□ 1.13
CD47-202ENST00000361309 FAM217AQ8IXS0 508 aa22.09■■□□□ 1.13
CD47-202ENST00000361309 C1orf216Q8TAB5 229 aa22.09■■□□□ 1.13
CD47-202ENST00000361309 SEMA4DQ92854 862 aa22.09■■□□□ 1.13
CD47-202ENST00000361309 PLD4Q96BZ4 506 aa22.09■■□□□ 1.13
CD47-202ENST00000361309 TMEM176AQ96HP8 235 aa22.09■■□□□ 1.13
CD47-202ENST00000361309 CISHQ9NSE2 258 aa22.09■■□□□ 1.13
CD47-202ENST00000361309 LOC400499M0QZD8 3231 aa22.08■■□□□ 1.13
CD47-202ENST00000361309 A0A1B0GVT2 93 aa22.08■■□□□ 1.13
CD47-202ENST00000361309 TIMM44O43615 452 aa22.08■■□□□ 1.13
CD47-202ENST00000361309 CMA1P23946 247 aa22.08■■□□□ 1.13
CD47-202ENST00000361309 PSMC2P35998 433 aaKnown RBP22.08■■□□□ 1.13
CD47-202ENST00000361309 RAD23BP54727 409 aa22.08■■□□□ 1.13
CD47-202ENST00000361309 ENPEPQ07075 957 aa22.08■■□□□ 1.13
CD47-202ENST00000361309 KRT39Q6A163 491 aa22.08■■□□□ 1.13
CD47-202ENST00000361309 OR2T3Q8NH03 318 aa22.08■■□□□ 1.13
CD47-202ENST00000361309 SNX19Q92543 992 aa22.08■■□□□ 1.13
CD47-202ENST00000361309 NDRG1Q92597 394 aaKnown RBP22.08■■□□□ 1.13
CD47-202ENST00000361309 SNX21Q969T3 373 aa22.08■■□□□ 1.13
CD47-202ENST00000361309 ARID3AQ99856 593 aa22.08■■□□□ 1.13
CD47-202ENST00000361309 KIAA1522Q9P206 1035 aaPredicted RBP22.08■■□□□ 1.13
CD47-202ENST00000361309 URB1O60287 2271 aaKnown RBP22.07■■□□□ 1.12
CD47-202ENST00000361309 RHOBTB3O94955 611 aa22.07■■□□□ 1.12
CD47-202ENST00000361309 HSP90AA1P07900 732 aaKnown RBP22.07■■□□□ 1.12
CD47-202ENST00000361309 RPL13P26373 211 aaKnown RBP22.07■■□□□ 1.12
CD47-202ENST00000361309 HOXD9P28356 352 aaPredicted RBP22.07■■□□□ 1.12
CD47-202ENST00000361309 CSNK1EP49674 416 aaKnown RBP22.07■■□□□ 1.12
CD47-202ENST00000361309 TKTL1P51854 596 aa22.07■■□□□ 1.12
CD47-202ENST00000361309 ADAM9Q13443 819 aa22.07■■□□□ 1.12
CD47-202ENST00000361309 TRIP4Q15650 581 aaPredicted RBP22.07■■□□□ 1.12
CD47-202ENST00000361309 ARHGAP17Q68EM7 881 aa22.07■■□□□ 1.12
CD47-202ENST00000361309 ANKRD52Q8NB46 1076 aa22.07■■□□□ 1.12
CD47-202ENST00000361309 BAHD1Q8TBE0 780 aaPredicted RBP22.07■■□□□ 1.12
CD47-202ENST00000361309 MDM1Q8TC05 714 aa22.07■■□□□ 1.12
CD47-202ENST00000361309 CCDC47Q96A33 483 aaKnown RBP22.07■■□□□ 1.12
CD47-202ENST00000361309 ULBP1Q9BZM6 244 aa22.07■■□□□ 1.12
CD47-202ENST00000361309 C6orf106Q9H6K1 298 aaPredicted RBP22.07■■□□□ 1.12
CD47-202ENST00000361309 HPSEQ9Y251 543 aa22.07■■□□□ 1.12
CD47-202ENST00000361309 SLCO1B1Q9Y6L6 691 aa22.07■■□□□ 1.12
CD47-202ENST00000361309 TSPAN3O60637 253 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 ZBED1O96006 694 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 GTF2H1P32780 548 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 ACSL1P33121 698 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 SLC8A3P57103 927 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 CAMK2GQ13555 558 aaPredicted RBP22.06■■□□□ 1.12
CD47-202ENST00000361309 FNDC3BQ53EP0 1204 aaKnown RBP22.06■■□□□ 1.12
CD47-202ENST00000361309 MPPE1Q53F39 396 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 PM20D1Q6GTS8 502 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 DBX2Q6ZNG2 339 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 BHLHA9Q7RTU4 235 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 FMNL3Q8IVF7 1028 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 TTC39CQ8N584 583 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 ZNF366Q8N895 744 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 RHBDD1Q8TEB9 315 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 CYB5D2Q8WUJ1 264 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 FAXDC2Q96IV6 333 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 PCED1AQ9H1Q7 454 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 LHX5Q9H2C1 402 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 TOR4AQ9NXH8 423 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 PCDHGB2Q9Y5G2 931 aa22.06■■□□□ 1.12
CD47-202ENST00000361309 PLXNA2O75051 1894 aa22.05■■□□□ 1.12
CD47-202ENST00000361309 TULP2O00295 520 aa22.05■■□□□ 1.12
CD47-202ENST00000361309 FLRT2O43155 660 aa22.05■■□□□ 1.12
CD47-202ENST00000361309 ATXN1LP0C7T5 689 aaKnown RBP22.05■■□□□ 1.12
CD47-202ENST00000361309 HLA-FP30511 346 aa22.05■■□□□ 1.12
CD47-202ENST00000361309 HARS2P49590 506 aaKnown RBP22.05■■□□□ 1.12
CD47-202ENST00000361309 AFF3P51826 1226 aaKnown RBP22.05■■□□□ 1.12
CD47-202ENST00000361309 GUF1Q8N442 669 aaKnown RBP22.05■■□□□ 1.12
CD47-202ENST00000361309 FBXL13Q8NEE6 735 aa22.05■■□□□ 1.12
CD47-202ENST00000361309 TATDN2Q93075 761 aa22.05■■□□□ 1.12
CD47-202ENST00000361309 TMEM245Q9H330 911 aa22.05■■□□□ 1.12
CD47-202ENST00000361309 RAB20Q9NX57 234 aa22.05■■□□□ 1.12
CD47-202ENST00000361309 GOLGA8CPA6NN73 597 aa22.04■■□□□ 1.12
CD47-202ENST00000361309 SYKP43405 635 aa22.04■■□□□ 1.12
CD47-202ENST00000361309 MXI1P50539 228 aa22.04■■□□□ 1.12
CD47-202ENST00000361309 DPYDQ12882 1025 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms