RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 MMP19Q99542 508 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 NOL6Q9H6R4 1146 aaKnown RBP14.3□□□□□ -0.12
SMC5-201ENST00000361138 LRRC4CQ9HCJ2 640 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 PNPLA3Q9NST1 481 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 COMMD8Q9NX08 183 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 DDHD2O94830 711 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 PYGLP06737 847 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 ACAT1P24752 427 aaKnown RBP14.3□□□□□ -0.12
SMC5-201ENST00000361138 RARRES1P49788 294 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 MTTPP55157 894 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 POU4F1Q01851 419 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 TTC7BQ86TV6 843 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 L3MBTL3Q96JM7 780 aaPredicted RBP14.3□□□□□ -0.12
SMC5-201ENST00000361138 FAM208AQ9UK61 1670 aaKnown RBP14.3□□□□□ -0.12
SMC5-201ENST00000361138 TMEM114B3SHH9 223 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 RTN3O95197 1032 aaPredicted RBP14.3□□□□□ -0.12
SMC5-201ENST00000361138 C6orf222P0C671 652 aaPredicted RBP14.3□□□□□ -0.12
SMC5-201ENST00000361138 GNL1P36915 607 aaPredicted RBP14.3□□□□□ -0.12
SMC5-201ENST00000361138 INAQ16352 499 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 TMEM63BQ5T3F8 832 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 SZRD1Q7Z422 152 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 TXNRD3Q86VQ6 643 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 KCNMB4Q86W47 210 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 SH3GL1Q99961 368 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 PRMT7Q9NVM4 692 aaPredicted RBP14.3□□□□□ -0.12
SMC5-201ENST00000361138 GALNT8Q9NY28 637 aa14.3□□□□□ -0.12
SMC5-201ENST00000361138 MAP3K20Q9NYL2 800 aaKnown RBP14.3□□□□□ -0.12
SMC5-201ENST00000361138 C2orf71A6NGG8 1288 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 PDZK1P1A8MUH7 402 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 PRR5-ARHGAP8B1AHC4 643 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 MYL3P08590 195 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 NR2C2P49116 596 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 ARHGAP8P85298 464 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 MAPK11Q15759 364 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 HYIQ5T013 277 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 RSBN1Q5VWQ0 802 aaPredicted RBP14.29□□□□□ -0.12
SMC5-201ENST00000361138 SLC30A10Q6XR72 485 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 ABI1Q8IZP0 508 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 GIPC3Q8TF64 312 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 PPP1R10Q96QC0 940 aaKnown RBP14.29□□□□□ -0.12
SMC5-201ENST00000361138 SEPHS2Q99611 448 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 MECRQ9BV79 373 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 OSBPL11Q9BXB4 747 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 NMRAL1Q9HBL8 299 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 TRIM24O15164 1050 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 LDLRP01130 860 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 CD4P01730 458 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 MYL4P12829 197 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 CNPY1Q3B7I2 92 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 RFWD3Q6PCD5 774 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 C6orf89Q6UWU4 347 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 MPZL3Q6UWV2 235 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 OLFML1Q6UWY5 402 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 SPOCK2Q92563 424 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 DCUN1D1Q96GG9 259 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 ZNF570Q96NI8 536 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 SH3GLB1Q9Y371 365 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 SPATA31A5Q5VU36 1347 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 SPATA31A7Q8IWB4 1347 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 RNF103O00237 685 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 FANCGO15287 622 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 PTPN11Q06124 597 aaPredicted RBP14.29□□□□□ -0.12
SMC5-201ENST00000361138 RAD51Q06609 339 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 CYP51A1Q16850 503 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 HTR3CQ8WXA8 447 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 CADM1Q9BY67 442 aaKnown RBP14.29□□□□□ -0.12
SMC5-201ENST00000361138 SMARCAD1Q9H4L7 1026 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 PCDHGB4Q9UN71 923 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 EIF3LQ9Y262 564 aaKnown RBP14.29□□□□□ -0.12
SMC5-201ENST00000361138 RGSL1A5PLK6 1076 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 INPP4BO15327 924 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 MICAL2O94851 1124 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 ADRB2P07550 413 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 PSMB9P28065 219 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 MIPP30301 263 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 GALK1P51570 392 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 CSTF3Q12996 717 aaKnown RBP14.29□□□□□ -0.12
SMC5-201ENST00000361138 FAM98BQ52LJ0 330 aaKnown RBP14.29□□□□□ -0.12
SMC5-201ENST00000361138 CAMK1DQ8IU85 385 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 MAP4K3Q8IVH8 894 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 FGFBP2Q9BYJ0 223 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 RNPEPQ9H4A4 650 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 PIH1D1Q9NWS0 290 aaKnown RBP14.29□□□□□ -0.12
SMC5-201ENST00000361138 FAM32AQ9Y421 112 aaKnown RBP14.29□□□□□ -0.12
SMC5-201ENST00000361138 TGDSO95455 350 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 CYP3A4P08684 503 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 SHMT1P34896 483 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 IL5RAQ01344 420 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 POLD3Q15054 466 aaPredicted RBP14.29□□□□□ -0.12
SMC5-201ENST00000361138 EFCAB12Q6NXP0 572 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 NPNTQ6UXI9 565 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 POLNQ7Z5Q5 900 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 PABPC5Q96DU9 382 aaKnown RBP14.29□□□□□ -0.12
SMC5-201ENST00000361138 UNKQ9C0B0 810 aaKnown RBP14.29□□□□□ -0.12
SMC5-201ENST00000361138 GRHL1Q9NZI5 618 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 NDUFAF1Q9Y375 327 aa14.29□□□□□ -0.12
SMC5-201ENST00000361138 hCG_1818297A0A087WSY0 165 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 TCRBV7S2A1N4TA0A589 114 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 NCAM1P13591 858 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 CCNB1P14635 433 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms