RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 RNPEPL1Q9HAU8 725 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 CD274Q9NZQ7 290 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 DCXO43602 365 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 YBX3P16989 372 aaKnown RBP eCLIP16.77■□□□□ 0.282e-7■■□□□ 13
SCAF1-201ENST00000360565 HADHBP55084 474 aaKnown RBP16.77■□□□□ 0.28
SCAF1-201ENST00000360565 BNC2Q6ZN30 1099 aaPredicted RBP16.77■□□□□ 0.28
SCAF1-201ENST00000360565 MOB2Q70IA6 237 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 RFWD2Q8NHY2 731 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 MUC3BQ9H195 1237 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 ZFYVE28Q9HCC9 887 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 NT5MQ9NPB1 228 aa16.77■□□□□ 0.28
SCAF1-201ENST00000360565 UPP2O95045 317 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 VAPBO95292 243 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 CYLC2Q14093 348 aaPredicted RBP16.77■□□□□ 0.27
SCAF1-201ENST00000360565 FASTKD3Q14CZ7 662 aaKnown RBP16.77■□□□□ 0.27
SCAF1-201ENST00000360565 MAP1SQ66K74 1059 aaPredicted RBP16.77■□□□□ 0.27
SCAF1-201ENST00000360565 TLCD1Q96CP7 247 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 TUBGCP3Q96CW5 907 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 OSBPL7Q9BZF2 842 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 COQ4Q9Y3A0 265 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 A0A0A0MRY4 1105 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 SYCE1LA8MT33 242 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 LRCH4O75427 683 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 ARF4P18085 180 aaPredicted RBP16.77■□□□□ 0.27
SCAF1-201ENST00000360565 PEX5P50542 639 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 MRNIPQ6NTE8 343 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 PIGZQ86VD9 579 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 SPDYE1Q8NFV5 336 aaPredicted RBP16.77■□□□□ 0.27
SCAF1-201ENST00000360565 SPATA13Q96N96 652 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 GPAMQ9HCL2 828 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 OLA1Q9NTK5 396 aaKnown RBP16.77■□□□□ 0.27
SCAF1-201ENST00000360565 SNX5Q9Y5X3 404 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 MYPNQ86TC9 1320 aa16.77■□□□□ 0.27
SCAF1-201ENST00000360565 RPTORQ8N122 1335 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 ENTPD5O75356 428 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 PSMB4P28070 264 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 CDC25CP30307 473 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 NCALDP61601 193 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 SLC34A1Q06495 639 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 TBL3Q12788 808 aaKnown RBP16.76■□□□□ 0.27
SCAF1-201ENST00000360565 OTOAQ7RTW8 1153 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 ATP6V0D2Q8N8Y2 350 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 ZC3H15Q8WU90 426 aaKnown RBP16.76■□□□□ 0.27
SCAF1-201ENST00000360565 APBA2Q99767 749 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 hCG_2014768A0A024R1R8 64 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 EDF1O60869 148 aaKnown RBP16.76■□□□□ 0.27
SCAF1-201ENST00000360565 RAD51Q06609 339 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 EFEMP1Q12805 493 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 SPDYAQ5MJ70 313 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 TREML2Q5T2D2 321 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 UNC93AQ86WB7 457 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 NETO2Q8NC67 525 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 PRDM12Q9H4Q4 367 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 APOBEC3GQ9HC16 384 aaKnown RBP16.76■□□□□ 0.27
SCAF1-201ENST00000360565 TRPC7Q9HCX4 862 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 V9GYQ6 96 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 SCN11AQ9UI33 1791 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 CNTNAP2Q9UHC6 1331 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 FKBP6O75344 327 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 PDE5AO76074 875 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 NFKBIAP25963 317 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 ACVR2BQ13705 512 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 ZRANB3Q5FWF4 1079 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 KYAT3Q6YP21 454 aaKnown RBP16.76■□□□□ 0.27
SCAF1-201ENST00000360565 RNF148Q8N7C7 305 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 BHMTQ93088 406 aa16.76■□□□□ 0.27
SCAF1-201ENST00000360565 NTPCRQ9BSD7 190 aaKnown RBP16.76■□□□□ 0.27
SCAF1-201ENST00000360565 MAGEB16A2A368 324 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 HACD1B0YJ81 288 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 MTA2O94776 668 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 TOMM70O94826 608 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 USP17L7P0C7H9 530 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 IRF1P10914 325 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 RGS2P41220 211 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 GRTP1Q5TC63 336 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 SH3TC2Q8TF17 1288 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 GAD1Q99259 594 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 POPDC2Q9HBU9 364 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 PDGFCQ9NRA1 345 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 FAM53CQ9NYF3 392 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 PDP2Q9P2J9 529 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 DNM1LO00429 736 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 STX7O15400 261 aaKnown RBP16.75■□□□□ 0.27
SCAF1-201ENST00000360565 NOS2P35228 1153 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 NME5P56597 212 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 DCAF12L1Q5VU92 463 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 PTRHD1Q6GMV3 140 aaKnown RBP16.75■□□□□ 0.27
SCAF1-201ENST00000360565 TIGD7Q6NT04 549 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-201ENST00000360565 ZDHHC24Q6UX98 284 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 EP400NLQ6ZTU2 488 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 PTAR1Q7Z6K3 402 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-201ENST00000360565 TFAP2DQ7Z6R9 452 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 RNF168Q8IYW5 571 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-201ENST00000360565 OR52K1Q8NGK4 314 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 SPOCK2Q92563 424 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 WNT8BQ93098 351 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 FBXO32Q969P5 355 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 LGMNQ99538 433 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 KCNK4Q9NYG8 393 aa16.75■□□□□ 0.27
SCAF1-201ENST00000360565 SLC17A7Q9P2U7 560 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms