RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 WNT7BP56706 349 aa6.3□□□□□ -1.4
CDC42SE2-201ENST00000360515 CCT2P78371 535 aaKnown RBP6.3□□□□□ -1.4
CDC42SE2-201ENST00000360515 GOLGA8FQ08AF8 430 aa6.3□□□□□ -1.4
CDC42SE2-201ENST00000360515 RAD51AP2Q09MP3 1159 aa6.3□□□□□ -1.4
CDC42SE2-201ENST00000360515 GOLGA8DPQ0D2H9 430 aa6.3□□□□□ -1.4
CDC42SE2-201ENST00000360515 SQSTM1Q13501 440 aa6.3□□□□□ -1.4
CDC42SE2-201ENST00000360515 ISXQ2M1V0 245 aa6.3□□□□□ -1.4
CDC42SE2-201ENST00000360515 ZNF776Q68DI1 518 aaPredicted RBP6.3□□□□□ -1.4
CDC42SE2-201ENST00000360515 USP49Q70CQ1 688 aa6.3□□□□□ -1.4
CDC42SE2-201ENST00000360515 ZMIZ2Q8NF64 920 aa6.3□□□□□ -1.4
CDC42SE2-201ENST00000360515 DUSP23Q9BVJ7 150 aa6.3□□□□□ -1.4
CDC42SE2-201ENST00000360515 GZF1Q9H116 711 aaPredicted RBP6.3□□□□□ -1.4
CDC42SE2-201ENST00000360515 TLR4O00206 839 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 STC2O76061 302 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 PLA2G4BP0C869 781 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 PTPN1P18031 435 aaKnown RBP6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 SLC6A4P31645 630 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 NNTQ13423 1086 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 KRT79Q5XKE5 535 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 PM20D1Q6GTS8 502 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 MSANTD2Q6P1R3 559 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 RSRC2Q7L4I2 434 aaKnown RBP6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 ABI3BPQ7Z7G0 1075 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 AHI1Q8N157 1196 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 SGF29Q96ES7 293 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 BTBD1Q9H0C5 482 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 PREBQ9HCU5 417 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 DMAP1Q9NPF5 467 aaPredicted RBP6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 GDF3Q9NR23 364 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 SEPT3Q9UH03 358 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 GTF3C4Q9UKN8 822 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 ADH1BP00325 375 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 SLFN14P0C7P3 912 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 PRR29P0C7W0 189 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 CPA1P15085 419 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 CACNA2D1P54289 1103 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 CDH8P55286 799 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 OSTNP61366 133 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 EPM2AIP1Q7L775 607 aaPredicted RBP6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 FBXO18Q8NFZ0 1043 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 SMARCD1Q96GM5 515 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 REEP2Q9BRK0 252 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 TRPC7Q9HCX4 862 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 TLR8Q9NR97 1041 aaKnown RBP6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 CYTH4Q9UIA0 394 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 EXOC7Q9UPT5 735 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 SH3BP1Q9Y3L3 701 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 HBS1LQ9Y450 684 aaKnown RBP6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 ENTPD2Q9Y5L3 495 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 MYO18AQ92614 2054 aaKnown RBP6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 MBL2P11226 248 aaPredicted RBP6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 CSNK1EP49674 416 aaKnown RBP6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 MAP7Q14244 749 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 PSMD6Q15008 389 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 BHLHA9Q7RTU4 235 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 SNX29Q8TEQ0 813 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 CCNL2Q96S94 520 aaPredicted RBP6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 SLC12A9Q9BXP2 914 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 LSM7Q9UK45 103 aaKnown RBP6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 HS3ST3A1Q9Y663 406 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 PTPRJQ12913 1337 aa6.29□□□□□ -1.4
CDC42SE2-201ENST00000360515 MAPK13O15264 365 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 POLR2BP30876 1174 aaKnown RBP6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 RPL34P49207 117 aaKnown RBP6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 ARRB1P49407 418 aaPredicted RBP6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 TBR1Q16650 682 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 GEN1Q17RS7 908 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 TAF1BQ53T94 588 aaPredicted RBP6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 ARHGAP18Q8N392 663 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 SLC25A45Q8N413 288 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 GPBAR1Q8TDU6 330 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 FAM117AQ9C073 453 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 A0A1W2PQ27 194 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 A0A1W2PQ64 194 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 A0A1W2PQC6 194 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 FAM149AA5PLN7 773 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 VWA3AA6NCI4 1184 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 EIF3DO15371 548 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 C5AR1P21730 350 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 HOXD9P28356 352 aaPredicted RBP6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 OXCT1P55809 520 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 EIF4EBP2Q13542 120 aaPredicted RBP6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 FAM35AQ86V20 835 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 CHPFQ8IZ52 775 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 RGL4Q8IZJ4 473 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 B3GALNT2Q8NCR0 500 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 RAD54LQ92698 747 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 PDRG1Q9NUG6 133 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 STK17AQ9UEE5 414 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 PCDHGA3Q9Y5H0 932 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 CCDC187A0A096LP49 1063 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 EME2A4GXA9 379 aaPredicted RBP6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 HNRNPDLO14979 420 aaKnown RBP6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 SCAMP1O15126 338 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 LIPCP11150 499 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 LMO2P25791 158 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 ACSL1P33121 698 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 ATP5C1P36542 298 aaKnown RBP6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 SLC5A3P53794 718 aa6.28□□□□□ -1.4
CDC42SE2-201ENST00000360515 GABREP78334 506 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms