RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 WDR72Q3MJ13 1102 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 C1orf131Q8NDD1 294 aaKnown RBP13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 DNAJC1Q96KC8 554 aaKnown RBP13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 CARD8Q9Y2G2 431 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 CHP2O43745 196 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 RARGP13631 454 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 ITGA3P26006 1051 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 NAA20P61599 178 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 TUBA4AP68366 448 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 GPSM2P81274 684 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 XKR3Q5GH77 459 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 TMEM138Q9NPI0 162 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 GPRC5DQ9NZD1 345 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 PFDN2Q9UHV9 154 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 REREQ9P2R6 1566 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 CCDC88CQ9P219 2028 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 FAM196BA6NMK8 535 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 PDGFRAP16234 1089 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 CCNA2P20248 432 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 PTPN3P26045 913 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 CCDC157Q569K6 752 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 CYB5R4Q7L1T6 521 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 MCOLN3Q8TDD5 553 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 OXNAD1Q96HP4 312 aaPredicted RBP13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 CRNNQ9UBG3 495 aaPredicted RBP13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 PLOD3O60568 738 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 PRKAA2P54646 552 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 PLCL1Q15111 1095 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 ZNF304Q9HCX3 659 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 KCNQ3O43525 872 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 CST8O60676 142 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 ALOX5P09917 674 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 ETS2P15036 469 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 HPCAL1P37235 193 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 PTGER2P43116 358 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 RENBPP51606 427 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 ERO1BQ86YB8 467 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 AGAP11Q8TF27 550 aa13.52□□□□□ -0.25
SRGAP3-201ENST00000360413 NPHP3-ACAD11A0A0J9YXS1 232 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 FAM92AA1XBS5 289 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 NPR3P17342 541 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 CLK3P49761 638 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 ZNF846Q147U1 533 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 SWSAP1Q6NVH7 229 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 DSG4Q86SJ6 1040 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 CDC42EP4Q9H3Q1 356 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 TRNAU1APQ9NX07 287 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 A0A0B4J269 797 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 GNG14A0A1W2PPG7 69 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 RBP1P09455 135 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 STIP1P31948 543 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 ACLYP53396 1101 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 TUBB3Q13509 450 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 PPP1R10Q96QC0 940 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 ZFYVE28Q9HCC9 887 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 PLA2G4CQ9UP65 541 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 BAIAP2Q9UQB8 552 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 ITGA4P13612 1032 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 SLC1A6P48664 564 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 PIK3CGP48736 1102 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 HSF2Q03933 536 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 MZT2AQ6P582 158 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 PI16Q6UXB8 463 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 STK32CQ86UX6 486 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 AMER2Q8N7J2 671 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 COLEC11Q9BWP8 271 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 TEX13BQ9BXU2 312 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 TIMMDC1Q9NPL8 285 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 TCF7L2Q9NQB0 619 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 POLR1AO95602 1720 aaPredicted RBP13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 UBE2QL1A1L167 161 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 KLRC1P26715 233 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 MMP14P50281 582 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 NCOA4Q13772 614 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 ZFP69Q49AA0 526 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 NECAB2Q7Z6G3 386 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 FBXO36Q8NEA4 188 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 FAM129BQ96TA1 746 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 NFKBIZQ9BYH8 718 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 PDGFCQ9NRA1 345 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 AREL1O15033 823 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 GLRBP48167 497 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 PDK3Q15120 406 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 ATXN2LQ8WWM7 1075 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 ZNF224Q9NZL3 707 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 HIST1H2ABP04908 130 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 SPIRE1Q08AE8 756 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 TRAP1Q12931 704 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 CAMK1Q14012 370 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 TAF13Q15543 124 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 SCARA3Q6AZY7 606 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 HIST3H2AQ7L7L0 130 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 ZNF605Q86T29 641 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 ZDHHC13Q8IUH4 622 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 CCDC36Q8IYA8 594 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 ZNF671Q8TAW3 534 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 HIST1H2ACQ93077 130 aa13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 EIF2AK1Q9BQI3 630 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-201ENST00000360413 WDR12Q9GZL7 423 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms