RNA–Protein interactions for RNA: ENST00000359984.12

CLN3-205, Transcript of CLN3, battenin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-205ENST00000359984 GJA1P17302 382 aa20.62■□□□□ 0.89
CLN3-205ENST00000359984 CDC25CP30307 473 aa20.62■□□□□ 0.89
CLN3-205ENST00000359984 CCR2P41597 374 aa20.62■□□□□ 0.89
CLN3-205ENST00000359984 ITIH3Q06033 890 aa20.62■□□□□ 0.89
CLN3-205ENST00000359984 VSIG1Q86XK7 387 aa20.62■□□□□ 0.89
CLN3-205ENST00000359984 C12orf76Q8N812 135 aaPredicted RBP20.62■□□□□ 0.89
CLN3-205ENST00000359984 RPGRIP1Q96KN7 1286 aa20.62■□□□□ 0.89
CLN3-205ENST00000359984 SLC22A12Q96S37 553 aa20.62■□□□□ 0.89
CLN3-205ENST00000359984 ZNF670Q9BS34 389 aa20.62■□□□□ 0.89
CLN3-205ENST00000359984 ATXN3LQ9H3M9 355 aa20.62■□□□□ 0.89
CLN3-205ENST00000359984 NSUN3Q9H649 340 aaKnown RBP20.62■□□□□ 0.89
CLN3-205ENST00000359984 IGFLR1Q9H665 355 aa20.62■□□□□ 0.89
CLN3-205ENST00000359984 CWC15Q9P013 229 aaKnown RBP20.62■□□□□ 0.89
CLN3-205ENST00000359984 MYO9BQ13459 2157 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 ZNF487B1APH4 448 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 FAM72CH0Y354 149 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 TJP3O95049 919 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 RHOP08100 348 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 POU2F2P09086 479 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 KPNA1P52294 538 aaPredicted RBP20.61■□□□□ 0.89
CLN3-205ENST00000359984 RING1Q06587 406 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 SEMA3BQ13214 749 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 ANKRD20A8PQ5CZ79 823 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 TCEAL5Q5H9L2 206 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 FAM72AQ5TYM5 149 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 FAM72DQ6L9T8 149 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 FAM72BQ86X60 149 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 NOA1Q8NC60 698 aaKnown RBP20.61■□□□□ 0.89
CLN3-205ENST00000359984 FAF2Q96CS3 445 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 RNF157Q96PX1 679 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 GCNAQ96QF7 691 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 HAPLN3Q96S86 360 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 CYP2S1Q96SQ9 504 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 OSBPL2Q9H1P3 480 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 XPO7Q9UIA9 1087 aaKnown RBP20.61■□□□□ 0.89
CLN3-205ENST00000359984 ANAPC1Q9H1A4 1944 aa20.61■□□□□ 0.89
CLN3-205ENST00000359984 PAGE1O75459 146 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 MOCS2O96007 188 aaPredicted RBP20.6■□□□□ 0.89
CLN3-205ENST00000359984 HYAL1Q12794 435 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 RFX6Q8HWS3 928 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 PRELID2Q8N945 189 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 PCDH19Q8TAB3 1148 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 SHKBP1Q8TBC3 707 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 MAIP1Q8WWC4 291 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 TCEAL4Q96EI5 215 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 CSPG4P5Q96PW8 444 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 MAK16Q9BXY0 300 aaKnown RBP20.6■□□□□ 0.89
CLN3-205ENST00000359984 CST8O60676 142 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 FGF19O95750 216 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 OLFM2O95897 454 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 APOEP02649 317 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 GOT1P17174 413 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 GGCXP38435 758 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 KCNQ1P51787 676 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 NTHL1P78549 312 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 BBS12Q6ZW61 710 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 PDZD4Q76G19 769 aaPredicted RBP20.6■□□□□ 0.89
CLN3-205ENST00000359984 GRASPQ7Z6J2 395 aaPredicted RBP20.6■□□□□ 0.89
CLN3-205ENST00000359984 PQLC3Q8N755 202 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 ARL14EPQ8N8R7 260 aaPredicted RBP20.6■□□□□ 0.89
CLN3-205ENST00000359984 KLF16Q9BXK1 252 aaPredicted RBP20.6■□□□□ 0.89
CLN3-205ENST00000359984 SIK2Q9H0K1 926 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 TTYH1Q9H313 450 aaPredicted RBP20.6■□□□□ 0.89
CLN3-205ENST00000359984 PRDM12Q9H4Q4 367 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 GKN1Q9NS71 199 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 RCOR3Q9P2K3 495 aaPredicted RBP20.6■□□□□ 0.89
CLN3-205ENST00000359984 OR12D3Q9UGF7 316 aa20.6■□□□□ 0.89
CLN3-205ENST00000359984 R3HDM2Q9Y2K5 976 aaKnown RBP20.6■□□□□ 0.89
CLN3-205ENST00000359984 CREB3O43889 395 aa20.59■□□□□ 0.89
CLN3-205ENST00000359984 MOSPD3O75425 235 aa20.59■□□□□ 0.89
CLN3-205ENST00000359984 PAPLNO95428 1278 aa20.59■□□□□ 0.89
CLN3-205ENST00000359984 HDCP19113 662 aa20.59■□□□□ 0.89
CLN3-205ENST00000359984 ARL4AP40617 200 aa20.59■□□□□ 0.89
CLN3-205ENST00000359984 DYNLT1P63172 113 aa20.59■□□□□ 0.89
CLN3-205ENST00000359984 COG7P83436 770 aa20.59■□□□□ 0.89
CLN3-205ENST00000359984 NAA30Q147X3 362 aaPredicted RBP20.59■□□□□ 0.89
CLN3-205ENST00000359984 SLC5A9Q2M3M2 681 aa20.59■□□□□ 0.89
CLN3-205ENST00000359984 STXBP5Q5T5C0 1151 aa20.59■□□□□ 0.89
CLN3-205ENST00000359984 MAB21L3Q8N8X9 362 aa20.59■□□□□ 0.89
CLN3-205ENST00000359984 LEMD2Q8NC56 503 aa20.59■□□□□ 0.89
CLN3-205ENST00000359984 GOLGA6L10A0A0M3HER8 536 aa20.58■□□□□ 0.89
CLN3-205ENST00000359984 H3BRJ5 948 aa20.58■□□□□ 0.89
CLN3-205ENST00000359984 GLP2RO95838 553 aa20.58■□□□□ 0.89
CLN3-205ENST00000359984 MBL2P11226 248 aaPredicted RBP20.58■□□□□ 0.89
CLN3-205ENST00000359984 TMC5Q6UXY8 1006 aa20.58■□□□□ 0.89
CLN3-205ENST00000359984 ATP6V0D2Q8N8Y2 350 aa20.58■□□□□ 0.89
CLN3-205ENST00000359984 SMG7Q92540 1137 aaKnown RBP20.58■□□□□ 0.89
CLN3-205ENST00000359984 ZFRQ96KR1 1074 aaKnown RBP20.58■□□□□ 0.89
CLN3-205ENST00000359984 BTN2A3PQ96KV6 586 aa20.58■□□□□ 0.89
CLN3-205ENST00000359984 SFXN1Q9H9B4 322 aa20.58■□□□□ 0.89
CLN3-205ENST00000359984 DZANK1Q9NVP4 752 aa20.58■□□□□ 0.89
CLN3-205ENST00000359984 SLC12A6Q9UHW9 1150 aa20.58■□□□□ 0.89
CLN3-205ENST00000359984 HS3ST4Q9Y661 456 aa20.58■□□□□ 0.89
CLN3-205ENST00000359984 OBSL1O75147 1896 aa20.58■□□□□ 0.89
CLN3-205ENST00000359984 DOCK6Q96HP0 2047 aa20.58■□□□□ 0.89
CLN3-205ENST00000359984 EFCAB8A8MWE9 144 aa20.58■□□□□ 0.88
CLN3-205ENST00000359984 CCDC188H7C350 402 aa20.58■□□□□ 0.88
CLN3-205ENST00000359984 LINC01565O15544 149 aa20.58■□□□□ 0.88
CLN3-205ENST00000359984 TFDP2Q14188 446 aa20.58■□□□□ 0.88
CLN3-205ENST00000359984 PIK3R6Q5UE93 754 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms