RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 PLGP00747 810 aaPredicted RBP10□□□□□ -0.81
CHD3-202ENST00000358181 PRG2P13727 222 aa10□□□□□ -0.81
CHD3-202ENST00000358181 CENPCQ03188 943 aa10□□□□□ -0.81
CHD3-202ENST00000358181 KCNH2Q12809 1159 aa10□□□□□ -0.81
CHD3-202ENST00000358181 PPP1R18Q6NYC8 613 aa10□□□□□ -0.81
CHD3-202ENST00000358181 FBXL19Q6PCT2 694 aa10□□□□□ -0.81
CHD3-202ENST00000358181 TMC5Q6UXY8 1006 aa10□□□□□ -0.81
CHD3-202ENST00000358181 SUSD6Q92537 303 aa10□□□□□ -0.81
CHD3-202ENST00000358181 CRELD1Q96HD1 420 aa10□□□□□ -0.81
CHD3-202ENST00000358181 PRRG3Q9BZD7 231 aa10□□□□□ -0.81
CHD3-202ENST00000358181 ELOVL6Q9H5J4 265 aa10□□□□□ -0.81
CHD3-202ENST00000358181 CLEC4AQ9UMR7 237 aa10□□□□□ -0.81
CHD3-202ENST00000358181 NOX1Q9Y5S8 564 aa10□□□□□ -0.81
CHD3-202ENST00000358181 ALG6Q9Y672 507 aa10□□□□□ -0.81
CHD3-202ENST00000358181 PRDM15P57071 1507 aaPredicted RBP10□□□□□ -0.81
CHD3-202ENST00000358181 TRBV23OR9-2A0A075B6M9 112 aa10□□□□□ -0.81
CHD3-202ENST00000358181 FAM92AA1XBS5 289 aa10□□□□□ -0.81
CHD3-202ENST00000358181 MFAP3LO75121 409 aa10□□□□□ -0.81
CHD3-202ENST00000358181 SEC13P55735 322 aa10□□□□□ -0.81
CHD3-202ENST00000358181 PLGLB1Q02325 96 aa10□□□□□ -0.81
CHD3-202ENST00000358181 PTK7Q13308 1070 aa10□□□□□ -0.81
CHD3-202ENST00000358181 CHI3L2Q15782 390 aa10□□□□□ -0.81
CHD3-202ENST00000358181 RESP18Q5W5W9 173 aa10□□□□□ -0.81
CHD3-202ENST00000358181 ALLCQ8N6M5 410 aa10□□□□□ -0.81
CHD3-202ENST00000358181 ARRDC4Q8NCT1 418 aa10□□□□□ -0.81
CHD3-202ENST00000358181 PARD6BQ9BYG5 372 aa10□□□□□ -0.81
CHD3-202ENST00000358181 UBP1Q9NZI7 540 aa10□□□□□ -0.81
CHD3-202ENST00000358181 VPS51Q9UID3 782 aa10□□□□□ -0.81
CHD3-202ENST00000358181 KCNA5P22460 613 aa10□□□□□ -0.81
CHD3-202ENST00000358181 CCNE1P24864 410 aa10□□□□□ -0.81
CHD3-202ENST00000358181 CTNNB1P35222 781 aa10□□□□□ -0.81
CHD3-202ENST00000358181 RCVRNP35243 200 aa10□□□□□ -0.81
CHD3-202ENST00000358181 PSMD4P55036 377 aaKnown RBP10□□□□□ -0.81
CHD3-202ENST00000358181 NOTUMQ6P988 496 aa10□□□□□ -0.81
CHD3-202ENST00000358181 TFAP2DQ7Z6R9 452 aa10□□□□□ -0.81
CHD3-202ENST00000358181 MPP5Q8N3R9 675 aa10□□□□□ -0.81
CHD3-202ENST00000358181 PJA1Q8NG27 643 aa10□□□□□ -0.81
CHD3-202ENST00000358181 ZNF669Q96BR6 464 aaPredicted RBP10□□□□□ -0.81
CHD3-202ENST00000358181 C1QTNF7Q9BXJ2 289 aa10□□□□□ -0.81
CHD3-202ENST00000358181 DDIT4Q9NX09 232 aa10□□□□□ -0.81
CHD3-202ENST00000358181 STOML1Q9UBI4 398 aa10□□□□□ -0.81
CHD3-202ENST00000358181 SLC12A4Q9UP95 1085 aa10□□□□□ -0.81
CHD3-202ENST00000358181 A0A1W2PQ27 194 aa10□□□□□ -0.81
CHD3-202ENST00000358181 A0A1W2PQ64 194 aa10□□□□□ -0.81
CHD3-202ENST00000358181 A0A1W2PQD8 194 aa10□□□□□ -0.81
CHD3-202ENST00000358181 CFAP73A6NFT4 308 aa10□□□□□ -0.81
CHD3-202ENST00000358181 STX16-NPEPL1H3BU86 382 aa10□□□□□ -0.81
CHD3-202ENST00000358181 STX16O14662 325 aa10□□□□□ -0.81
CHD3-202ENST00000358181 ZNF862O60290 1169 aa10□□□□□ -0.81
CHD3-202ENST00000358181 PSMB9P28065 219 aa10□□□□□ -0.81
CHD3-202ENST00000358181 HSD17B3P37058 310 aa10□□□□□ -0.81
CHD3-202ENST00000358181 ATP2C1P98194 919 aaPredicted RBP10□□□□□ -0.81
CHD3-202ENST00000358181 SEMA3AQ14563 771 aa10□□□□□ -0.81
CHD3-202ENST00000358181 DEFB132Q7Z7B7 95 aa10□□□□□ -0.81
CHD3-202ENST00000358181 CHERPQ8IWX8 916 aaKnown RBP10□□□□□ -0.81
CHD3-202ENST00000358181 DNAAF1Q8NEP3 725 aa10□□□□□ -0.81
CHD3-202ENST00000358181 CPT1CQ8TCG5 803 aa10□□□□□ -0.81
CHD3-202ENST00000358181 KLHL32Q96NJ5 620 aa10□□□□□ -0.81
CHD3-202ENST00000358181 TRABDQ9H4I3 376 aa10□□□□□ -0.81
CHD3-202ENST00000358181 GBA2Q9HCG7 927 aaPredicted RBP10□□□□□ -0.81
CHD3-202ENST00000358181 MAGEB3O15480 346 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 CNOT3O75175 753 aaKnown RBP9.99□□□□□ -0.81
CHD3-202ENST00000358181 NUDT17P0C025 328 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 CYP2A7P20853 494 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 E2F7Q96AV8 911 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 WWP1Q9H0M0 922 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 ABCB6Q9NP58 842 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 DIS3Q9Y2L1 958 aaKnown RBP9.99□□□□□ -0.81
CHD3-202ENST00000358181 SHROOM2Q13796 1616 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 TRIM38O00635 465 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 SCAMP1O15126 338 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 MT-CO1P00395 513 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 EPORP19235 508 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 ITGALP20701 1170 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 KLRK1P26718 216 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 CYP2C19P33261 490 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 STARP49675 285 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 TRIM16LQ309B1 348 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 GALNT7Q86SF2 657 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 LDHDQ86WU2 507 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 SRBD1Q8N5C6 995 aaKnown RBP9.99□□□□□ -0.81
CHD3-202ENST00000358181 SLC20A1Q8WUM9 679 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 TMEM159Q96B96 161 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 FICDQ9BVA6 458 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 SEPT3Q9UH03 358 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 RCOR1Q9UKL0 485 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 FZD1Q9UP38 647 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 H3BMM5 538 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 CHP2O43745 196 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 IRX1P78414 480 aaPredicted RBP9.99□□□□□ -0.81
CHD3-202ENST00000358181 ATP6AP1LQ52LC2 224 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 ARSHQ5FYA8 562 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 FAM172AQ8WUF8 416 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 VPS33AQ96AX1 596 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 CYFIP2Q96F07 1278 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 APOL2Q9BQE5 337 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 TIMM13Q9Y5L4 95 aaPredicted RBP9.99□□□□□ -0.81
CHD3-202ENST00000358181 MYL12AP19105 171 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 TYMPP19971 482 aa9.99□□□□□ -0.81
CHD3-202ENST00000358181 ACO1P21399 889 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms