RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 GRIN3BO60391 1043 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 KLHL2O95198 593 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 CST3P01034 146 aaPredicted RBP10.28□□□□□ -0.76
RNF40-202ENST00000357890 SNRPAP09012 282 aaKnown RBP10.28□□□□□ -0.76
RNF40-202ENST00000357890 FDFT1P37268 417 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 ARL1P40616 181 aaPredicted RBP10.28□□□□□ -0.76
RNF40-202ENST00000357890 RGS7P49802 495 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 NRLP54845 237 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 PAOXQ6QHF9 649 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 ANKLE1Q8NAG6 615 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 DCUN1D1Q96GG9 259 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 ZNF518BQ9C0D4 1074 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 MAN1C1Q9NR34 630 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 TRIM17Q9Y577 477 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 PRPF4O43172 522 aaKnown RBP eCLIP10.28□□□□□ -0.76
RNF40-202ENST00000357890 AVILO75366 819 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 LYPLA1O75608 230 aaPredicted RBP10.28□□□□□ -0.76
RNF40-202ENST00000357890 FAM155BO75949 473 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 EIF4BP23588 611 aaKnown RBP10.28□□□□□ -0.76
RNF40-202ENST00000357890 PAX3P23760 479 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 TNFSF9P41273 254 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 ABHD15Q6UXT9 468 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 EXOC8Q8IYI6 725 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 TSPAN14Q8NG11 270 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 LRRN4Q8WUT4 740 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 CYGBQ8WWM9 190 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 SPATA17Q96L03 361 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 GID8Q9NWU2 228 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 RSL24D1Q9UHA3 163 aaKnown RBP10.28□□□□□ -0.76
RNF40-202ENST00000357890 GRID1Q9ULK0 1009 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 DCAF8L1A6NGE4 600 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 PRKCBP05771 671 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 ACTR3P61158 418 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 ITGA9Q13797 1035 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 PERM1Q5SV97 790 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 TTC33Q6PID6 262 aaPredicted RBP10.28□□□□□ -0.76
RNF40-202ENST00000357890 FASTKD5Q7L8L6 764 aaKnown RBP10.28□□□□□ -0.76
RNF40-202ENST00000357890 UNC45BQ8IWX7 931 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 GABPB2Q8TAK5 448 aaPredicted RBP10.28□□□□□ -0.76
RNF40-202ENST00000357890 PGBD4Q96DM1 585 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 PDGFDQ9GZP0 370 aaPredicted RBP10.28□□□□□ -0.76
RNF40-202ENST00000357890 DMTF1Q9Y222 760 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 HBS1LQ9Y450 684 aaKnown RBP10.28□□□□□ -0.76
RNF40-202ENST00000357890 HEMK1Q9Y5R4 338 aaPredicted RBP10.28□□□□□ -0.76
RNF40-202ENST00000357890 ADAMTSL1Q8N6G6 1762 aa10.28□□□□□ -0.76
RNF40-202ENST00000357890 AKAP10O43572 662 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 PENKP01210 267 aaPredicted RBP10.27□□□□□ -0.76
RNF40-202ENST00000357890 OSBPP22059 807 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 KLRC2P26717 231 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 ETFBP38117 255 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 SLC5A3P53794 718 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 KLF1Q13351 362 aaPredicted RBP10.27□□□□□ -0.76
RNF40-202ENST00000357890 PDAP1Q13442 181 aaKnown RBP10.27□□□□□ -0.76
RNF40-202ENST00000357890 FNBP1LQ5T0N5 605 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 RNASEH2BQ5TBB1 312 aaKnown RBP10.27□□□□□ -0.76
RNF40-202ENST00000357890 LRRC38Q5VT99 294 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 WDR49Q8IV35 697 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 CCNYQ8ND76 341 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 ZNF398Q8TD17 642 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 SEPT1Q8WYJ6 367 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 CDKL2Q92772 493 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 APOPT1Q96IL0 206 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 BRD8Q9H0E9 1235 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 CCDC68Q9H2F9 335 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 HESX1Q9UBX0 185 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 DRG1Q9Y295 367 aaKnown RBP10.27□□□□□ -0.76
RNF40-202ENST00000357890 FOCADQ5VW36 1801 aa10.27□□□□□ -0.76
RNF40-202ENST00000357890 SPATA31C2B4DYI2 1134 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 OGTO15294 1046 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 CSDE1O75534 798 aaKnown RBP10.27□□□□□ -0.77
RNF40-202ENST00000357890 ITGAVP06756 1048 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 RPS12P25398 132 aaKnown RBP10.27□□□□□ -0.77
RNF40-202ENST00000357890 GDF10P55107 478 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 ANKS1BQ7Z6G8 1248 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 TREML1Q86YW5 311 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 BRSK2Q8IWQ3 736 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 FAM149B1Q96BN6 582 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 CCDC138Q96M89 665 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 C2orf40Q9H1Z8 148 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 ACSS3Q9H6R3 686 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 RSAD1Q9HA92 442 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 GPATCH2LQ9NWQ4 482 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 BARX2Q9UMQ3 279 aaPredicted RBP10.27□□□□□ -0.77
RNF40-202ENST00000357890 USP18Q9UMW8 372 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 ATP11BQ9Y2G3 1177 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 A0A0B4J269 797 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 GMPSP49915 693 aaPredicted RBP10.27□□□□□ -0.77
RNF40-202ENST00000357890 NUP107P57740 925 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 GHRHRQ02643 423 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 MAPK11Q15759 364 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 NEDD8Q15843 81 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 PDPK2PQ6A1A2 396 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 NPNTQ6UXI9 565 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 SIX5Q8N196 739 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 TMCO5AQ8N6Q1 288 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 CDRT15Q96T59 188 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 EBF4Q9BQW3 602 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 PLGRKTQ9HBL7 147 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 FZD1Q9UP38 647 aa10.27□□□□□ -0.77
RNF40-202ENST00000357890 PCDHGA4Q9Y5G9 962 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms