RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 TSHRP16473 764 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 SLC26A2P50443 739 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 PGGT1BP53609 377 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 OCRLQ01968 901 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 NME3Q13232 169 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 ATG16L1Q676U5 607 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 CDKL3Q8IVW4 592 aaPredicted RBP21.1■□□□□ 0.97
COL13A1-202ENST00000357811 SLC2A14Q8TDB8 520 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 OSMRQ99650 979 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 SLC4A5Q9BY07 1137 aa21.1■□□□□ 0.97
COL13A1-202ENST00000357811 MAP3K13O43283 966 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 USP1O94782 785 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 SLC25A27O95847 323 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 ERVK-10P10266 1014 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 ATP6V1C1P21283 382 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 TSNAXIP1Q2TAA8 658 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 N4BP2L1Q5TBK1 243 aaPredicted RBP21.09■□□□□ 0.97
COL13A1-202ENST00000357811 ZNF670Q9BS34 389 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 VRTNQ9H8Y1 702 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 SPDYE5A6NIY4 337 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 CLDN5O00501 218 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 DNAJC6O75061 913 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 BPGMP07738 259 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 ACAT1P24752 427 aaKnown RBP21.09■□□□□ 0.97
COL13A1-202ENST00000357811 PDE1BQ01064 536 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 TEX44Q53QW1 395 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 DCAF6Q58WW2 860 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 CTU1Q7Z7A3 348 aaKnown RBP21.09■□□□□ 0.97
COL13A1-202ENST00000357811 TMEM110Q86TL2 294 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 COLGALT1Q8NBJ5 622 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 HIPK4Q8NE63 616 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 AZIN2Q96A70 460 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 PNPLA8Q9NP80 782 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 DNAJC16Q9Y2G8 782 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 HBS1LQ9Y450 684 aaKnown RBP21.09■□□□□ 0.97
COL13A1-202ENST00000357811 MFSD11O43934 449 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 SORBS2O94875 1100 aaKnown RBP21.09■□□□□ 0.97
COL13A1-202ENST00000357811 IGFBP6P24592 240 aaPredicted RBP21.09■□□□□ 0.97
COL13A1-202ENST00000357811 LRRC36Q1X8D7 754 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 PKDCCQ504Y2 493 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 NCBP2-AS2Q69YL0 99 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 ATG14Q6ZNE5 492 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 CATSPER4Q7RTX7 472 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 OPTNQ96CV9 577 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 ZFATQ9P243 1243 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 C2CD2Q9Y426 696 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 PPME1Q9Y570 386 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 CITO14578 2027 aa21.09■□□□□ 0.97
COL13A1-202ENST00000357811 ALDOAP04075 364 aaKnown RBP21.08■□□□□ 0.97
COL13A1-202ENST00000357811 SLC25A3Q00325 362 aa21.08■□□□□ 0.97
COL13A1-202ENST00000357811 PPP2R5DQ14738 602 aa21.08■□□□□ 0.97
COL13A1-202ENST00000357811 R3HDM1Q15032 1099 aaKnown RBP21.08■□□□□ 0.97
COL13A1-202ENST00000357811 ZNF484Q5JVG2 852 aa21.08■□□□□ 0.97
COL13A1-202ENST00000357811 TMEM154Q6P9G4 183 aa21.08■□□□□ 0.97
COL13A1-202ENST00000357811 CMC1Q7Z7K0 106 aa21.08■□□□□ 0.97
COL13A1-202ENST00000357811 HTR3CQ8WXA8 447 aa21.08■□□□□ 0.97
COL13A1-202ENST00000357811 RTP4Q96DX8 246 aa21.08■□□□□ 0.97
COL13A1-202ENST00000357811 SYT15Q9BQS2 421 aa21.08■□□□□ 0.97
COL13A1-202ENST00000357811 SIRPGQ9P1W8 387 aa21.08■□□□□ 0.97
COL13A1-202ENST00000357811 TRDMT1O14717 391 aaKnown RBP21.08■□□□□ 0.96
COL13A1-202ENST00000357811 C6orf222P0C671 652 aaPredicted RBP21.08■□□□□ 0.96
COL13A1-202ENST00000357811 IREB2P48200 963 aaKnown RBP21.08■□□□□ 0.96
COL13A1-202ENST00000357811 LRRC74BQ6ZQY2 392 aa21.08■□□□□ 0.96
COL13A1-202ENST00000357811 LMNTD2Q8IXW0 634 aa21.08■□□□□ 0.96
COL13A1-202ENST00000357811 TNS4Q8IZW8 715 aa21.08■□□□□ 0.96
COL13A1-202ENST00000357811 CCDC124Q96CT7 223 aaKnown RBP21.08■□□□□ 0.96
COL13A1-202ENST00000357811 PPP1R36Q96LQ0 422 aa21.08■□□□□ 0.96
COL13A1-202ENST00000357811 CYP4F11Q9HBI6 524 aa21.08■□□□□ 0.96
COL13A1-202ENST00000357811 XAB2Q9HCS7 855 aaKnown RBP21.08■□□□□ 0.96
COL13A1-202ENST00000357811 KCNK4Q9NYG8 393 aa21.08■□□□□ 0.96
COL13A1-202ENST00000357811 DLGAP2Q9P1A6 1054 aa21.08■□□□□ 0.96
COL13A1-202ENST00000357811 LOC100653049A0A140TA62 436 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 FAM159BA6NKW6 160 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 SPTLC1O15269 473 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 ZMPSTE24O75844 475 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 KRT34O76011 436 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 LUC7L3O95232 432 aaKnown RBP21.07■□□□□ 0.96
COL13A1-202ENST00000357811 LINGO3P0C6S8 592 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 PSMB4P28070 264 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 VHLP40337 213 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 NDUFV1P49821 464 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 GPC2Q8N158 579 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 PGBD4Q96DM1 585 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 ZNF333Q96JL9 665 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 PNPOQ9NVS9 261 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 ZNF180Q9UJW8 692 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 PCDHA11Q9Y5I1 949 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 ARHGAP42A6NI28 874 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 MDM4O15151 490 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 DESP17661 470 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 GRIK4Q16099 956 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 ERO1BQ86YB8 467 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 KBTBD2Q8IY47 623 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 DEFB106AQ8N104 65 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 TFB1MQ8WVM0 346 aaKnown RBP21.07■□□□□ 0.96
COL13A1-202ENST00000357811 TEKT4Q8WW24 435 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 ZNF778Q96MU6 729 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 APOL2Q9BQE5 337 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 WWP1Q9H0M0 922 aa21.07■□□□□ 0.96
COL13A1-202ENST00000357811 RNF103O00237 685 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms