RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 RNF44Q7L0R7 432 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 NECAB2Q7Z6G3 386 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 USP7Q93009 1102 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.78□□□□□ -0.525e-7■□□□□ 10.2
SPTBN1-202ENST00000356805 RAD54BQ9Y620 910 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 BAATQ14032 418 aaPredicted RBP11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 EPC2Q52LR7 807 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 MIIPQ5JXC2 388 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 MIB1Q86YT6 1006 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 AMER2Q8N7J2 671 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 HASPINQ8TF76 798 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 CDC42EP4Q9H3Q1 356 aaKnown RBP11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 VAC14Q08AM6 782 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 TCEAL5Q5H9L2 206 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 KLHDC7AQ5VTJ3 777 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 FAM228AQ86W67 206 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 BORCS5Q969J3 196 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 PTPRHQ9HD43 1115 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 CROCC2H7BZ55 1655 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 ZC3H11AO75152 810 aaKnown RBP eCLIP11.78□□□□□ -0.528e-9■■■■□ 21.9
SPTBN1-202ENST00000356805 IFNA14P01570 189 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 FDX1P10109 184 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 RBP3P10745 1247 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 KCNJ1P48048 391 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 SAMD4BQ5PRF9 694 aaKnown RBP11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 CAMK1DQ8IU85 385 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 CLVS1Q8IUQ0 354 aaPredicted RBP11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 TDRD5Q8NAT2 981 aaKnown RBP11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 SCAF8Q9UPN6 1271 aaKnown RBP11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 EXTL3O43909 919 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 ITGA3P26006 1051 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 ZNF844Q08AG5 666 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 RIPPLY1Q0D2K3 151 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 TSNQ15631 228 aaKnown RBP11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 MAPK11Q15759 364 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 PARP6Q2NL67 630 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 XKR3Q5GH77 459 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 PALB2Q86YC2 1186 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 DMGDHQ9UI17 866 aaKnown RBP11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 PPP1R3GB7ZBB8 358 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 AP3D1O14617 1153 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 CYP24A1Q07973 514 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 OR6Y1Q8NGX8 325 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 IPCEF1Q8WWN9 437 aaPredicted RBP11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 FIG4Q92562 907 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 FBXO10Q9UK96 956 aa11.78□□□□□ -0.52
SPTBN1-202ENST00000356805 SF3B1O75533 1304 aaKnown RBP eCLIP11.77□□□□□ -0.522e-7■■■■■ 73.6
SPTBN1-202ENST00000356805 MAGEB2O15479 319 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 HLA-DRAP01903 254 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 TCEA2Q15560 299 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 BOLA3Q53S33 107 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 FEZF2Q8TBJ5 459 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 TMEM169Q96HH4 297 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 OXNAD1Q96HP4 312 aaPredicted RBP11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 ACOX2Q99424 681 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 EMILIN2Q9BXX0 1053 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 CIPCQ9C0C6 399 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 ZFYVE16Q7Z3T8 1539 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 CASZ1Q86V15 1759 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 MATN2O00339 956 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 CYP2C9P11712 490 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 CCDC153Q494R4 210 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 CYP20A1Q6UW02 462 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 RNF180Q86T96 592 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 DNAJC1Q96KC8 554 aaKnown RBP11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 NLNQ9BYT8 704 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 DUSP12Q9UNI6 340 aa11.77□□□□□ -0.52
SPTBN1-202ENST00000356805 C17orf102A2RUQ5 167 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 H7C4K7 107 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 CLOCKO15516 846 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 CKMP06732 381 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 CDK7P50613 346 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 HLA-DQA1Q5Y7H0 255 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 TRMT11Q7Z4G4 463 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 EXOC3L1Q86VI1 746 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 SLC9A7Q96T83 725 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 SLITRK2Q9H156 845 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 PRR12Q9ULL5 1215 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 H7C1W4 665 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 BAIAP3O94812 1187 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 OR6B1O95007 311 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 ME2P23368 584 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 PSMB9P28065 219 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 TRAF3Q13114 568 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 NEUROD4Q9HD90 331 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 PLA2G4CQ9UP65 541 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 AAR2Q9Y312 384 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 H3BN98 237 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 FGRP09769 529 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 FAM98BQ52LJ0 330 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 CASP12Q6UXS9 341 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 R3HCC1LQ7Z5L2 792 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 DEFB107AQ8IZN7 70 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 UBXN6Q9BZV1 441 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 UNKQ9C0B0 810 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 NOL6Q9H6R4 1146 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 COMMD8Q9NX08 183 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 DMTF1Q9Y222 760 aa11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 ERN1O75460 977 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-202ENST00000356805 ALADP13716 330 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms