RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 CCSER2Q9H7U1 834 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 WDR6Q9NNW5 1121 aaKnown RBP14.36□□□□□ -0.11
LSS-201ENST00000356396 OR12D3Q9UGF7 316 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 ATP8B3O60423 1300 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 EEF2KO00418 725 aaKnown RBP14.36□□□□□ -0.11
LSS-201ENST00000356396 KPNA6O60684 536 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 LRIG2O94898 1065 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 ENDOD1O94919 500 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 RARGP13631 454 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 HSPA6P17066 643 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 ITIH2P19823 946 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 PSMB4P28070 264 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 PSMD5Q16401 504 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 HIF1AQ16665 826 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 SLC25A52Q3SY17 297 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 RFWD3Q6PCD5 774 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 OTOP3Q7RTS5 596 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 DQX1Q8TE96 717 aaKnown RBP14.36□□□□□ -0.11
LSS-201ENST00000356396 FBF1Q8TES7 1133 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 RGS18Q9NS28 235 aa14.36□□□□□ -0.11
LSS-201ENST00000356396 ZBBXA8MT70 800 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 CCL22O00626 93 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 GRIK3Q13003 919 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 SCD5Q86SK9 330 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 PYROXD1Q8WU10 500 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 AZIN2Q96A70 460 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 SMARCD1Q96GM5 515 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 COLEC11Q9BWP8 271 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 BRD8Q9H0E9 1235 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 GKN1Q9NS71 199 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 FRYLO94915 3013 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 STAU1O95793 577 aaKnown RBP14.35□□□□□ -0.11
LSS-201ENST00000356396 MT-CYBP00156 380 aaPredicted RBP14.35□□□□□ -0.11
LSS-201ENST00000356396 KRT15P19012 456 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 LSP1P33241 339 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 OR1D2P34982 312 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 LHX1P48742 406 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 TAP1Q03518 808 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 FNIP1Q8TF40 1166 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 GRK7Q8WTQ7 553 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 KLHL5Q96PQ7 755 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 SMIM14Q96QK8 99 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 FZD10Q9ULW2 581 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 KNL1Q8NG31 2342 aa14.35□□□□□ -0.11
LSS-201ENST00000356396 BUD23O43709 281 aaKnown RBP14.34□□□□□ -0.11
LSS-201ENST00000356396 SETSIPP0DME0 302 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 ETFBP38117 255 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 ARL4AP40617 200 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 IRF5Q13568 498 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 PTPRRQ15256 657 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 PID1Q7Z2X4 250 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 MRPL10Q7Z7H8 261 aaKnown RBP14.34□□□□□ -0.11
LSS-201ENST00000356396 NPY6RQ99463 290 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 CHST12Q9NRB3 414 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 MARCH5Q9NX47 278 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 KIAA1257Q9ULG3 409 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 FNDC3AQ9Y2H6 1198 aaKnown RBP14.34□□□□□ -0.11
LSS-201ENST00000356396 ATP9BO43861 1147 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 ZNF623O75123 536 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 CNTN5O94779 1100 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 GCAP28676 217 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 ADRA1BP35368 520 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 PCK1P35558 622 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 KCNQ1P51787 676 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 TSPY1Q01534 308 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 RASIP1Q5U651 963 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 MREGQ8N565 214 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 P2RY11Q96G91 374 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 ZNF778Q96MU6 729 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 CASD1Q96PB1 797 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 UBN1Q9NPG3 1134 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 DMDP11532 3685 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 GON4LQ3T8J9 2241 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 NDUFAB1O14561 156 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 SAT1P21673 171 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 TPI1P60174 286 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 BOLA3Q53S33 107 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 LRRC38Q5VT99 294 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 BTBD8Q5XKL5 378 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 IL31Q6EBC2 164 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 PALM2Q8IXS6 379 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 PGBD4Q96DM1 585 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.34□□□□□ -0.11
LSS-201ENST00000356396 WHRNQ9P202 907 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 ADAM28Q9UKQ2 775 aa14.34□□□□□ -0.11
LSS-201ENST00000356396 NRG2O14511 850 aaPredicted RBP14.33□□□□□ -0.12
LSS-201ENST00000356396 TRIM66O15016 1216 aa14.33□□□□□ -0.12
LSS-201ENST00000356396 SLC4A1P02730 911 aa14.33□□□□□ -0.12
LSS-201ENST00000356396 PCSK1P29120 753 aa14.33□□□□□ -0.12
LSS-201ENST00000356396 NOS2P35228 1153 aa14.33□□□□□ -0.12
LSS-201ENST00000356396 TAF10Q12962 218 aa14.33□□□□□ -0.12
LSS-201ENST00000356396 PCSK7Q16549 785 aa14.33□□□□□ -0.12
LSS-201ENST00000356396 SPRED3Q2MJR0 410 aa14.33□□□□□ -0.12
LSS-201ENST00000356396 KBTBD12Q3ZCT8 623 aa14.33□□□□□ -0.12
LSS-201ENST00000356396 EFHC1Q5JVL4 640 aa14.33□□□□□ -0.12
LSS-201ENST00000356396 HEATR6Q6AI08 1181 aaKnown RBP14.33□□□□□ -0.12
LSS-201ENST00000356396 PPM1NQ8N819 430 aa14.33□□□□□ -0.12
LSS-201ENST00000356396 WBP2Q969T9 261 aa14.33□□□□□ -0.12
LSS-201ENST00000356396 EXOC4Q96A65 974 aa14.33□□□□□ -0.12
LSS-201ENST00000356396 C11orf84Q9BUA3 381 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms