RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 EPB41L4AQ9HCS5 686 aaPredicted RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 NT5MQ9NPB1 228 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SPATA31A1Q5TZJ5 1347 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PRR23AA6NEV1 266 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 MEI4A8MW99 385 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PIK3CDO00329 1044 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 OPLAHO14841 1288 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PEX1O43933 1283 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PDE5AO76074 875 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PDE9AO76083 593 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PCDH8O95206 1070 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 CYP1A1P04798 512 aaPredicted RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 ANXA6P08133 673 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 SLC2A4P14672 509 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 CYP2F1P24903 491 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 POU1F1P28069 291 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 NOS3P29474 1203 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 NPTX2P47972 431 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 KCNJ1P48048 391 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 CPA2P48052 419 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 BACE1P56817 501 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 MYL6P60660 151 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 POLR2LP62875 67 aaKnown RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 STX4Q12846 297 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 GRB10Q13322 594 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PKN1Q16512 942 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 FBXO47Q5MNV8 452 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PMF1Q6P1K2 205 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 WDR93Q6P2C0 686 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 MACC1Q6ZN28 852 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 KRT74Q7RTS7 529 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 BSNDQ8WZ55 320 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 MAML3Q96JK9 1138 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 VAT1Q99536 393 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 INTS13Q9NVM9 706 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 UBA2Q9UBT2 640 aaPredicted RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 TRIM10Q9UDY6 481 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 SHOC2Q9UQ13 582 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 TPRKBQ9Y3C4 175 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PTPRUQ92729 1446 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PNMA8CA0A1B0GUJ8 204 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 CBX4O00257 560 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 CES2O00748 559 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 KLHL41O60662 606 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 MYL12AP19105 171 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 SERPINH1P50454 418 aaKnown RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 TKTL1P51854 596 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 AQP5P55064 265 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 TBX4P57082 545 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PTPN11Q06124 597 aaPredicted RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 CSHL1Q14406 222 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 NR6A1Q15406 480 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 TCEA2Q15560 299 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ALG11Q2TAA5 492 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 SLC45A4Q5BKX6 768 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 FBXW10Q5XX13 1052 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 METTL7BQ6UX53 244 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ZNF410Q86VK4 478 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 FAM228AQ86W67 206 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 KYQ8NBH2 561 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 COLGALT1Q8NBJ5 622 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 LPCAT1Q8NF37 534 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ATP8B4Q8TF62 1192 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 UBE2E3Q969T4 207 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 MMADHCQ9H3L0 296 aaPredicted RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 PIGUQ9H490 435 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 OSGEPL1Q9H4B0 414 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PXMP2Q9NR77 195 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 BARX2Q9UMQ3 279 aaPredicted RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 KDM6BO15054 1643 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 SPHKAPQ2M3C7 1700 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 BIRC5O15392 142 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 RGS14O43566 566 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 HS6ST1O60243 411 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 RAMP2O60895 175 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 STX11O75558 287 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 SERPINE1P05121 402 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 TGFB3P10600 412 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PAX3P23760 479 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 RRM1P23921 792 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 YY1P25490 414 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 PTPN4P29074 926 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 CDK7P50613 346 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ANTXR2P58335 489 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ZNF268Q14587 947 aaPredicted RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 ACAP1Q15027 740 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 TBCELQ5QJ74 424 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ARMC3Q5W041 872 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ZFP1Q6P2D0 407 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 CYP20A1Q6UW02 462 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 TRMT11Q7Z4G4 463 aaKnown RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 VN1R5Q7Z5H4 357 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 MARCH10Q8NA82 808 aaPredicted RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 LINC00116Q8NCU8 138 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 POP5Q969H6 163 aaKnown RBP6.62□□□□□ -1.35
UPF2-201ENST00000356352 VCPIP1Q96JH7 1222 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ZDHHC15Q96MV8 337 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 ACOX2Q99424 681 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 S100A13Q99584 98 aa6.62□□□□□ -1.35
UPF2-201ENST00000356352 HDHD2Q9H0R4 259 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms