RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 OSER1Q9NX31 292 aa19.33■□□□□ 0.69
PTN-201ENST00000348225 SFMBT1Q9UHJ3 866 aa19.33■□□□□ 0.69
PTN-201ENST00000348225 IFNB1P01574 187 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 AMPD1P23109 780 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 DNAJB2P25686 324 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 STIP1P31948 543 aaKnown RBP19.33■□□□□ 0.68
PTN-201ENST00000348225 ELF1P32519 619 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 HSPA9P38646 679 aaKnown RBP19.33■□□□□ 0.68
PTN-201ENST00000348225 ALDH1A3P47895 512 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 TPI1P60174 286 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 SEMA3BQ13214 749 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 GPS2Q13227 327 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 XRCC4Q13426 336 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 MTMR3Q13615 1198 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 NCBP2-AS2Q69YL0 99 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 ZC3H18Q86VM9 953 aaKnown RBP19.33■□□□□ 0.68
PTN-201ENST00000348225 CDKL3Q8IVW4 592 aaPredicted RBP19.33■□□□□ 0.68
PTN-201ENST00000348225 PDZD8Q8NEN9 1154 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 SP7Q8TDD2 431 aaPredicted RBP19.33■□□□□ 0.68
PTN-201ENST00000348225 OVCA2Q8WZ82 227 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 HAPLN3Q96S86 360 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 CDK5RAP1Q96SZ6 601 aaKnown RBP19.33■□□□□ 0.68
PTN-201ENST00000348225 LBHD1Q9BQE6 289 aaPredicted RBP19.33■□□□□ 0.68
PTN-201ENST00000348225 ZBP1Q9H171 429 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 OSBPL2Q9H1P3 480 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 ANLNQ9NQW6 1124 aa19.33■□□□□ 0.68
PTN-201ENST00000348225 TLL1O43897 1013 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 SEC24AO95486 1093 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 CSH1P0DML2 217 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 CSH2P0DML3 217 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 CTSAP10619 480 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 SLC2A3P11169 496 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 ATP2A2P16615 1042 aaKnown RBP19.32■□□□□ 0.68
PTN-201ENST00000348225 SYN1P17600 705 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 IVDP26440 423 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 DPYSQ14117 519 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 PDZD4Q76G19 769 aaPredicted RBP19.32■□□□□ 0.68
PTN-201ENST00000348225 UBE2OQ9C0C9 1292 aaKnown RBP19.32■□□□□ 0.68
PTN-201ENST00000348225 TSPYL1Q9H0U9 437 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 RXFP1Q9HBX9 757 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.32■□□□□ 0.68
PTN-201ENST00000348225 ANAPC5Q9UJX4 755 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 HPCAL4Q9UM19 191 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 MAGED2Q9UNF1 606 aaPredicted RBP19.32■□□□□ 0.68
PTN-201ENST00000348225 TLR6Q9Y2C9 796 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 YIPF1Q9Y548 306 aa19.32■□□□□ 0.68
PTN-201ENST00000348225 MSI1O43347 362 aaKnown RBP19.31■□□□□ 0.68
PTN-201ENST00000348225 ZDHHC11BP0C7U3 371 aa19.31■□□□□ 0.68
PTN-201ENST00000348225 LINC00271P0C7V0 271 aa19.31■□□□□ 0.68
PTN-201ENST00000348225 HTR7P34969 479 aa19.31■□□□□ 0.68
PTN-201ENST00000348225 VEPH1Q14D04 833 aa19.31■□□□□ 0.68
PTN-201ENST00000348225 P3H1Q32P28 736 aa19.31■□□□□ 0.68
PTN-201ENST00000348225 IZUMO3Q5VZ72 239 aa19.31■□□□□ 0.68
PTN-201ENST00000348225 TADA2BQ86TJ2 420 aa19.31■□□□□ 0.68
PTN-201ENST00000348225 AUTS2Q8WXX7 1259 aa19.31■□□□□ 0.68
PTN-201ENST00000348225 OR12D3Q9UGF7 316 aa19.31■□□□□ 0.68
PTN-201ENST00000348225 NUDT5Q9UKK9 219 aa19.31■□□□□ 0.68
PTN-201ENST00000348225 BCLAF3A2AJT9 711 aaKnown RBP19.3■□□□□ 0.68
PTN-201ENST00000348225 I6L893 689 aaPredicted RBP19.3■□□□□ 0.68
PTN-201ENST00000348225 PRRG1O14668 218 aa19.3■□□□□ 0.68
PTN-201ENST00000348225 ITGA8P53708 1063 aa19.3■□□□□ 0.68
PTN-201ENST00000348225 GBE1Q04446 702 aa19.3■□□□□ 0.68
PTN-201ENST00000348225 GPS1Q13098 491 aa19.3■□□□□ 0.68
PTN-201ENST00000348225 PAFAH1B3Q15102 231 aaKnown RBP19.3■□□□□ 0.68
PTN-201ENST00000348225 TMC3Q7Z5M5 1100 aa19.3■□□□□ 0.68
PTN-201ENST00000348225 KLHL23Q8NBE8 558 aa19.3■□□□□ 0.68
PTN-201ENST00000348225 RWDD3Q9Y3V2 267 aa19.3■□□□□ 0.68
PTN-201ENST00000348225 HACD1B0YJ81 288 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 FAM72CH0Y354 149 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 DNALI1O14645 258 aaPredicted RBP19.29■□□□□ 0.68
PTN-201ENST00000348225 LILRB3O75022 631 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 ZNF189O75820 626 aaPredicted RBP19.29■□□□□ 0.68
PTN-201ENST00000348225 ZSCAN5DPP0CG00 497 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 CA8P35219 290 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 ACTN2P35609 894 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 GDF10P55107 478 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 TBX4P57082 545 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 DHX9Q08211 1270 aaKnown RBP19.29■□□□□ 0.68
PTN-201ENST00000348225 EFEMP1Q12805 493 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 TAF12Q16514 161 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 SLC45A4Q5BKX6 768 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 SPDYCQ5MJ68 293 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 C10orf120Q5SQS8 335 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 FAM72AQ5TYM5 149 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 RASIP1Q5U651 963 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 FAM72DQ6L9T8 149 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 PCGF5Q86SE9 256 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 FAM72BQ86X60 149 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 UNC45BQ8IWX7 931 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 TCEAL8Q8IYN2 117 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 FAM71DQ8N9W8 422 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 GLIS1Q8NBF1 620 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 TSEN2Q8NCE0 465 aaKnown RBP19.29■□□□□ 0.68
PTN-201ENST00000348225 ETNK2Q9NVF9 386 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 DTLQ9NZJ0 730 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 ZMYND8Q9ULU4 1186 aaPredicted RBP19.29■□□□□ 0.68
PTN-201ENST00000348225 TPX2Q9ULW0 747 aaKnown RBP19.29■□□□□ 0.68
PTN-201ENST00000348225 RAD54BQ9Y620 910 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 GOLGA6BA6NDN3 693 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 DCLK1O15075 740 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms