RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 NUMBP49757 651 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 GTF2A2P52657 109 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 JAG1P78504 1218 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 RAD51Q06609 339 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 PRKAA1Q13131 559 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 CYLC2Q14093 348 aaPredicted RBP7.38□□□□□ -1.23
VCAN-202ENST00000342785 VEPH1Q14D04 833 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 PLPPR4Q7Z2D5 763 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 ZNF410Q86VK4 478 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 KYQ8NBH2 561 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 JADE3Q92613 823 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 KAT2BQ92831 832 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 KLRG1Q96E93 195 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 APOBEC3GQ9HC16 384 aaKnown RBP7.38□□□□□ -1.23
VCAN-202ENST00000342785 STX7O15400 261 aaKnown RBP7.38□□□□□ -1.23
VCAN-202ENST00000342785 MGEA5O60502 916 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 PDE5AO76074 875 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 RHOBTB1O94844 696 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 CYP1A1P04798 512 aaPredicted RBP7.38□□□□□ -1.23
VCAN-202ENST00000342785 CCDC130P13994 396 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 CHRM3P20309 590 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 CDC25CP30307 473 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 ZNF157P51786 506 aaPredicted RBP7.38□□□□□ -1.23
VCAN-202ENST00000342785 PTK2BQ14289 1009 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 SLC1A5Q15758 541 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 USP6NLQ92738 828 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 WNT8BQ93098 351 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 EBNA1BP2Q99848 306 aaKnown RBP7.38□□□□□ -1.23
VCAN-202ENST00000342785 FBXO6Q9NRD1 293 aaPredicted RBP7.38□□□□□ -1.23
VCAN-202ENST00000342785 SLC17A7Q9P2U7 560 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 PROCP04070 461 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 THPOP40225 353 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 NAGLUP54802 743 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 TWF1Q12792 350 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 KCNMB4Q86W47 210 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 ECHDC2Q86YB7 292 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 HASPINQ8TF76 798 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 CDCA5Q96FF9 252 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 LGMNQ99538 433 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 CAAP1Q9H8G2 361 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 FAM8A1Q9UBU6 413 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 C2CD2Q9Y426 696 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 hCG_2014768A0A024R1R8 64 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 HACD1B0YJ81 288 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 SUPT3HB4E1H0 165 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 DHX15O43143 795 aaKnown RBP7.38□□□□□ -1.23
VCAN-202ENST00000342785 SUPT3HO75486 399 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 ERVK-10P10266 1014 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 YBX3P16989 372 aaKnown RBP eCLIP7.38□□□□□ -1.23
VCAN-202ENST00000342785 ARF4P18085 180 aaPredicted RBP7.38□□□□□ -1.23
VCAN-202ENST00000342785 FASTKD3Q14CZ7 662 aaKnown RBP7.38□□□□□ -1.23
VCAN-202ENST00000342785 ACCSLQ4AC99 568 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 LACTB2Q53H82 288 aaPredicted RBP7.38□□□□□ -1.23
VCAN-202ENST00000342785 LBX2Q6XYB7 198 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 TDRD5Q8NAT2 981 aaKnown RBP7.38□□□□□ -1.23
VCAN-202ENST00000342785 CPT1BQ92523 772 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 CCDC126Q96EE4 140 aa7.38□□□□□ -1.23
VCAN-202ENST00000342785 XRN1Q8IZH2 1706 aaKnown RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 CASTOR2A6NHX0 329 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 B4GALT4O60513 344 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 LTFP02788 710 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 RBP1P09455 135 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 NFKBIAP25963 317 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 CDKN2BP42772 138 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 CACNA2D1P54289 1103 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 RBBP7Q16576 425 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 PARP6Q2NL67 630 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 FNIP1Q8TF40 1166 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 TFAP2BQ92481 460 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 ZBTB10Q96DT7 871 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 THAP11Q96EK4 314 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 FAR2Q96K12 515 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 CCT7Q99832 543 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 GID8Q9NWU2 228 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 STX18Q9P2W9 335 aaKnown RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 TRHDEQ9UKU6 1024 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 SLC8A2Q9UPR5 921 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 SNX13Q9Y5W8 968 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 XPO1O14980 1071 aaKnown RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 PMM2O15305 246 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 PHGDHO43175 533 aaKnown RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 NOS2P35228 1153 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 C9orf131Q5VYM1 1079 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 ILDR2Q71H61 639 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 GPC2Q8N158 579 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 CNDP1Q96KN2 507 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 ZNF670Q9BS34 389 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 LHX5Q9H2C1 402 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 NMRAL1Q9HBL8 299 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 POPDC2Q9HBU9 364 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 CPA4Q9UI42 421 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 SYCE1LA8MT33 242 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 E7ENQ6 273 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 UNGP13051 313 aaPredicted RBP7.37□□□□□ -1.23
VCAN-202ENST00000342785 CCR1P32246 355 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 CD151P48509 253 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 CDK7P50613 346 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 BNIP1Q12981 228 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 OR52K1Q8NGK4 314 aa7.37□□□□□ -1.23
VCAN-202ENST00000342785 PLEKHO2Q8TD55 490 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms